{"id":"W2919695739","doi":"10.1371/journal.pone.0213366","title":"Assessing the role of transmission chains in the spread of HIV-1 among men who have sex with men in Quebec, Canada","year":2019,"lang":"en","type":"article","venue":"PLoS ONE","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal; McGill University; Jewish General Hospital; HEC Montréal","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Jewish General Hospital; Natural Sciences and Engineering Research Council of Canada; McGill University","keywords":"Men who have sex with men; Human immunodeficiency virus (HIV); Demography; Transmission (telecommunications); Male Homosexuality; Medicine; Biology; Gerontology; Virology; Telecommunications; Sociology; Syphilis; Computer science","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00216785,0.0003567367,0.0002248653,0.001502243,0.00219028,0.001266329,0.001034701,0.0004026592,0.002777213],"category_scores_gemma":[0.005901488,0.0001680915,0.0002824813,0.001851873,0.0007591843,0.0004545407,0.0007588041,0.0005712907,0.0001640762],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0209277,"about_ca_system_score_gemma":0.0187685,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9913264,"about_ca_topic_score_gemma":0.9935629,"domain_scores_codex":[0.9991583,0.0002421742,0.00003818113,0.0001441664,0.0001825495,0.0002346328],"domain_scores_gemma":[0.9958369,0.001188827,0.0008711052,0.0001490211,0.001514384,0.0004397419],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00007672249,0.00001671048,0.9828252,0.00006966801,0.00008406916,0.0000560203,0.00104831,0.002239633,0.0001942397,0.0004748468,0.0008638153,0.01205071],"study_design_scores_gemma":[0.000009551156,0.00003993274,0.9821137,0.0001145964,0.00006897864,0.00005260826,0.00249188,0.01292832,0.0002051604,0.000230722,0.001727297,0.00001722135],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9880418,0.001948775,0.002074535,0.0006580342,0.00001001664,0.00008208794,0.003569998,0.00002488646,0.003589916],"genre_scores_gemma":[0.9963424,0.0004392956,0.001329573,0.00007060773,0.000004974385,0.00001746098,0.001177921,0.000007164618,0.000610625],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0209277,"threshold_uncertainty_score":0.1518418,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01260428670421778,"score_gpt":0.2271672956380154,"score_spread":0.2145630089337976,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}