{"id":"W2919872889","doi":"10.1128/msphere.00102-19","title":"Loss of the Two-Component System TctD-TctE in <i>Pseudomonas aeruginosa</i> Affects Biofilm Formation and Aminoglycoside Susceptibility in Response to Citric Acid","year":2019,"lang":"en","type":"article","venue":"mSphere","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa","funders":"Cystic Fibrosis Canada; Natural Sciences and Engineering Research Council of Canada; Government of Canada; Health Canada; University of Ottawa","keywords":"Citric acid; Pseudomonas aeruginosa; Biofilm; Tobramycin; Microbiology; Aminoglycoside; Mutant; Chemistry; Biochemistry; Biology; Bacteria; Antibiotics; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004733444,0.0001468352,0.0002158434,0.00004634613,0.00002935714,0.00001961061,0.0001306294,0.0001277376,0.000004608279],"category_scores_gemma":[0.00005084082,0.000115398,0.00005759145,0.0002319696,0.00004117861,0.000009722165,0.0001634327,0.00009005063,0.000007650161],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005894716,"about_ca_system_score_gemma":0.00004014935,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002009763,"about_ca_topic_score_gemma":0.0009856746,"domain_scores_codex":[0.9988106,0.0002769121,0.0002723117,0.0002956988,0.0001098656,0.000234574],"domain_scores_gemma":[0.9993747,0.00002809152,0.0001049855,0.0004073348,0.00003366831,0.00005120348],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000848221,0.00002971404,0.05276836,0.0001031412,0.000004921136,0.000003502332,0.0001080046,0.00005461678,0.9451799,0.00001770815,0.00003430589,0.0008475351],"study_design_scores_gemma":[0.001086762,0.00016656,0.2002972,0.0001520644,0.000005250382,0.00001844312,0.0002355839,0.0001003535,0.797197,0.000002201946,0.0005964168,0.0001421077],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986078,0.0002315031,0.00001134133,0.0001624511,0.0001862166,0.0005678305,0.00001799906,0.000007252761,0.0002076565],"genre_scores_gemma":[0.9995751,0.00001371278,0.0002069175,0.00008964314,0.0000326405,0.000007365179,0.00001375479,0.00001194555,0.0000489488],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1479829,"threshold_uncertainty_score":0.4705794,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005240820347551511,"score_gpt":0.210179591997029,"score_spread":0.2049387716494775,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}