{"id":"W2919913482","doi":"10.1371/journal.pone.0212954","title":"Phylogenetic relationships within the primitive acanthomorph fish genus Polymixia, with changes to species composition and geographic distributions","year":2019,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Ichthyology and Marine Biology","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Division of Environmental Biology; South African Institute for Aquatic Biodiversity; Commonwealth Scientific and Industrial Research Organisation; Academy of Natural Sciences of Drexel University; Loyola University Chicago; Saginaw Valley State University; National Science Foundation; Field Museum; Muséum National d'Histoire Naturelle; Florida Museum of Natural History","keywords":"Biology; Clade; Phylogenetic tree; Genus; Evolutionary biology; Zoology; Phylogenetics; Mitochondrial DNA; Character evolution; Sister group; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001939894,0.0001997276,0.0001992726,0.001286632,0.0006942558,0.0004841538,0.0002673339,0.0003349909,0.001304829],"category_scores_gemma":[0.0004663557,0.0001560052,0.000138795,0.0006389694,0.0005538033,0.0004536771,0.000754758,0.0003732645,0.0002056989],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000354985,"about_ca_system_score_gemma":0.0002679068,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002770184,"about_ca_topic_score_gemma":0.003449353,"domain_scores_codex":[0.9998757,0.00001513239,0.000007416252,0.00004889735,0.00002396646,0.00002893353],"domain_scores_gemma":[0.9997525,0.0000546305,0.00009619054,0.00002086895,0.00003519599,0.00004069275],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004957443,0.00005187003,0.7438989,0.0001694011,0.0001419395,0.0004689655,0.00334193,0.0007615248,0.1826486,0.0007634337,0.0001801041,0.06707764],"study_design_scores_gemma":[0.00001107653,0.00006846015,0.9952986,0.00001936641,0.00003293238,0.0006306325,0.0004590356,0.001400606,0.00081681,0.0002834871,0.0009710293,0.000008069335],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985697,0.0002027881,0.000459996,0.000022811,0.000001052761,0.000005530263,0.00003204222,0.000008080367,0.0006979351],"genre_scores_gemma":[0.9987446,0.0001128658,0.0007757557,0.00001408084,0.00000477612,0.000008064222,0.00009587425,0.000002742643,0.000241224],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002770184,"threshold_uncertainty_score":0.005508125,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02322718246565536,"score_gpt":0.1888980252386171,"score_spread":0.1656708427729618,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}