{"id":"W2920959005","doi":"10.1007/s11274-019-2625-x","title":"Genome analysis of a Bacillus subtilis strain reveals genetic mutations determining biocontrol properties","year":2019,"lang":"en","type":"article","venue":"World Journal of Microbiology and Biotechnology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":29,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Population and Public Health; Shenzhen Metro Group; Horizon 2020; Szegedi Tudományegyetem; Magyar Tudományos Akadémia; King Saud University","keywords":"Bacillus subtilis; Biology; Prophage; Genetics; Sclerotinia sclerotiorum; Surfactin; Genome; Rhizoctonia solani; Gene; Microbiology; Bacteriophage; Botany; Bacteria; Escherichia coli","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002512872,0.0001190192,0.0004819744,0.0003100558,0.00008880089,0.00001311164,0.0002533783,0.0001970299,0.0003283537],"category_scores_gemma":[0.00004250691,0.00004954903,0.0001624745,0.0006315748,0.0002416776,0.00006071674,0.00006543855,0.0002888982,0.000006295396],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000173702,"about_ca_system_score_gemma":0.00001309098,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003652984,"about_ca_topic_score_gemma":0.000625425,"domain_scores_codex":[0.9989939,0.0001194756,0.0005102425,0.0001510156,0.00002889753,0.0001964708],"domain_scores_gemma":[0.9991791,0.000150031,0.0004585424,0.00006920659,0.000110987,0.00003214635],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00005825204,0.00004837035,0.008110492,0.00000551961,0.0003926978,0.000005839129,0.00005181189,0.00001905351,0.9806721,0.00001973345,0.00001048629,0.01060566],"study_design_scores_gemma":[0.001148251,0.002621122,0.5584677,0.0001646757,0.001303917,0.002241837,0.001945615,0.000168992,0.3951134,0.0002186824,0.03603807,0.0005677076],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969581,0.001508445,0.00001218028,0.001083742,0.00009332001,0.0001075925,0.0001955036,0.00001069288,0.00003042846],"genre_scores_gemma":[0.9991289,0.0002484649,0.000289948,0.0001041228,0.00002145907,0.000001374656,0.00003039773,7.992792e-7,0.0001745289],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5855587,"threshold_uncertainty_score":0.3595242,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01294943304655662,"score_gpt":0.2042170475359991,"score_spread":0.1912676144894425,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}