{"id":"W2920965761","doi":"10.1016/j.gene.2019.03.001","title":"Chromatin organization of transcribed genes in chicken polychromatic erythrocytes","year":2019,"lang":"en","type":"article","venue":"Gene","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Chromatin; ChIA-PET; ChIP-sequencing; Gene; Histone; Chromatin immunoprecipitation; DNA; Genetics; DNA sequencing; Nucleosome; ChIP-on-chip; genomic DNA; Genome; Cell biology; Gene expression; Promoter","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005539609,0.00006607822,0.00009891268,0.0003466814,0.0002192053,0.0002953604,0.0002177281,0.0001576082,0.001217321],"category_scores_gemma":[0.0001325328,0.0001353672,0.0000942757,0.0001880187,0.0002375352,0.0001459017,0.0001351669,0.0002491332,0.0002590204],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003231221,"about_ca_system_score_gemma":0.0001465823,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003434691,"about_ca_topic_score_gemma":0.005416779,"domain_scores_codex":[0.9999448,0.000007298284,0.000003326014,0.00002341082,0.000009943393,0.0000112437],"domain_scores_gemma":[0.9998052,0.00006077555,0.00002876935,0.00001823971,0.00004266985,0.00004446922],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001296428,0.000006621949,0.001409787,0.00001555559,0.000003024922,0.00003058433,0.00006578998,0.00009498254,0.9965257,0.0005352864,0.00002352867,0.001159597],"study_design_scores_gemma":[0.00004347487,0.0001748055,0.237022,0.00001861179,0.00002626418,0.0002862106,0.0004275695,0.003528575,0.754941,0.0006400342,0.002876628,0.00001479831],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9951015,0.0004174183,0.002247756,0.0000311787,0.000006093654,0.000006663178,0.0002106728,0.00001961786,0.00195927],"genre_scores_gemma":[0.9958117,0.0000919142,0.001037482,0.00001933726,0.000003604951,0.000009062363,0.0002503007,0.00001269327,0.002764035],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003434691,"threshold_uncertainty_score":0.006829381,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003127130896340593,"score_gpt":0.1884345315217708,"score_spread":0.1853074006254302,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}