{"id":"W2921405383","doi":"10.1128/mbio.02452-18","title":"Mitotic Recombination and Rapid Genome Evolution in the Invasive Forest Pathogen <i>Phytophthora ramorum</i>","year":2019,"lang":"en","type":"article","venue":"mBio","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":71,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval; FPInnovations; Canadian Food Inspection Agency; University of British Columbia","funders":"Canadian Food Inspection Agency; Forestry Commission; Genome Canada; Canada's Michael Smith Genome Sciences Centre; Alexander von Humboldt-Stiftung","keywords":"Phytophthora ramorum; Biology; Pathogen; Genome; Mitotic crossover; Mitosis; Phytophthora; Genetics; Recombination; Botany; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000254897,0.00007477244,0.00009110504,0.000009904248,0.00008399811,0.00004080845,0.0001330648,0.00006131862,0.00003906691],"category_scores_gemma":[0.00002181699,0.00002468507,0.00003121748,0.0001922348,0.00002396124,0.00007492764,0.00002534155,0.00007301005,0.00004223953],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002078442,"about_ca_system_score_gemma":0.000004629158,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004635124,"about_ca_topic_score_gemma":0.0008909904,"domain_scores_codex":[0.9993538,0.0000909083,0.0001080067,0.0001828922,0.0001061247,0.0001583041],"domain_scores_gemma":[0.9997337,0.0001275656,0.00004827179,0.00004700899,0.0000192041,0.00002417838],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00001315441,0.00003367786,0.04533873,0.000008341024,0.000001830105,0.000007832825,0.00002901506,0.000003451389,0.9521194,0.0003427558,0.00004421721,0.002057652],"study_design_scores_gemma":[0.0001109127,0.0001135005,0.995167,0.00001676395,0.000003343631,0.00001457074,0.0002809686,0.00002441724,0.0001820181,0.00095656,0.003046267,0.00008370405],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969363,0.0007203885,9.618113e-7,0.0008045004,0.0000908097,0.0002750317,0.00004589087,0.00001131545,0.001114768],"genre_scores_gemma":[0.999314,0.0001510276,0.0000182759,0.0001756143,0.00005632062,0.00001081832,0.00008000149,4.91043e-7,0.0001934603],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9519373,"threshold_uncertainty_score":0.1006628,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009203713977788673,"score_gpt":0.1736730237693581,"score_spread":0.1644693097915695,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}