{"id":"W2921650138","doi":"10.1038/s41587-019-0055-9","title":"The International Cancer Genome Consortium Data Portal","year":2019,"lang":"en","type":"letter","venue":"Nature Biotechnology","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":674,"is_retracted":false,"has_abstract":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Ontario Institute for Cancer Research","funders":"","keywords":"Genome; Cancer; Computational biology; Biology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005769618,0.0005485286,0.001222467,0.001670788,0.001920047,0.005380994,0.001885499,0.01566608,0.06818381],"category_scores_gemma":[0.03602392,0.0009216584,0.0008087168,0.001838082,0.00157156,0.004395668,0.003403201,0.01626443,0.04871951],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.004897533,"about_ca_system_score_gemma":0.005665748,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008953114,"about_ca_topic_score_gemma":0.01256429,"domain_scores_codex":[0.9961821,0.0008455507,0.0003882549,0.0002875859,0.001880093,0.0004163953],"domain_scores_gemma":[0.9734892,0.01183275,0.001310889,0.002127905,0.005900119,0.005339065],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00001096907,0.000003663354,0.00004588485,0.000008297471,0.000001227943,0.0000224894,0.000003287833,0.00001231122,0.00002124057,0.0008479825,0.9957657,0.003256815],"study_design_scores_gemma":[0.00002847203,0.000006109399,0.0001704834,0.00004995606,0.00000358102,0.00006058864,0.00001417159,0.000115425,0.00008410424,0.002332245,0.9971268,0.000008150204],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"commentary","genre_gemma":"software","genre_scores_codex":[0.0002990761,0.002484523,0.000921538,0.9095196,0.05067436,0.00005330415,0.005750316,0.0005881527,0.02970916],"genre_scores_gemma":[0.007055701,0.00446798,0.002793485,0.7846644,0.06883943,0.0003784506,0.009804609,0.0008905391,0.1211054],"genre_candidate":"software","genre_consensus":null,"teacher_disagreement_score":0.06818381,"threshold_uncertainty_score":0.2280976,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00987729893515375,"score_gpt":0.2666473678701261,"score_spread":0.2567700689349723,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}