{"id":"W2922062614","doi":"10.1128/jb.00731-18","title":"Entry Exclusion of Conjugative Plasmids of the IncA, IncC, and Related Untyped Incompatibility Groups","year":2019,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Institutes of Health Research; Fondation pour la Recherche Médicale; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Biology; Plasmid; Replicon; Salmonella enterica; Genetics; Genomic island; Antibiotic resistance; Horizontal gene transfer; Multiple drug resistance; Gene; Genome; Microbiology; Drug resistance; Antibiotics; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002080334,0.0002510905,0.0001977827,0.0005303725,0.000249593,0.0004531131,0.0001987494,0.0002220259,0.0005021727],"category_scores_gemma":[0.0003993958,0.0001152798,0.0002199299,0.0002575166,0.0002957427,0.0002272127,0.0005552865,0.0004903184,0.0002546454],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003483685,"about_ca_system_score_gemma":0.0003366158,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006134924,"about_ca_topic_score_gemma":0.0005510471,"domain_scores_codex":[0.9997054,0.00004652725,0.00001920571,0.00004473568,0.0001129075,0.00007128998],"domain_scores_gemma":[0.9995505,0.00009024073,0.0001146064,0.00008275553,0.00005491331,0.0001069553],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001258511,0.00004040853,0.002258416,0.00001046154,0.00000423059,0.0000859167,0.00004436049,0.00002637093,0.9949515,0.0003758294,0.00002183893,0.002054877],"study_design_scores_gemma":[0.00002218811,0.0004728709,0.04756745,0.000009229739,0.0000219997,0.001217618,0.0001348148,0.001751789,0.9464549,0.0002931925,0.002040707,0.00001322735],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978473,0.000132908,0.001161613,0.00002542808,0.000005895313,0.00000803307,0.00003478356,0.00001973256,0.0007641298],"genre_scores_gemma":[0.9976834,0.00005802405,0.001060489,0.00002165749,0.00000397869,0.00001031442,0.0002591542,0.00001273002,0.0008902428],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0006134924,"threshold_uncertainty_score":0.002527654,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004858671572330471,"score_gpt":0.2269554854625013,"score_spread":0.2220968138901708,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}