{"id":"W2922176834","doi":"10.1093/jcag/gwz006.004","title":"A5 ASSOCIATION ANALYSIS BETWEEN BILE ACID-METABOLIZING MICROBIOTA ABUNDANCE AND ENDOSCOPIC INFLAMMATION IN INFLAMMATORY BOWEL DISEASE PATIENTS","year":2019,"lang":"en","type":"article","venue":"Journal of the Canadian Association of Gastroenterology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Gastroenterology; Inflammatory bowel disease; Ulcerative colitis; Internal medicine; Primary sclerosing cholangitis; Colonoscopy; Inflammation; Bile acid; Gut flora; Medicine; Crohn's disease; Disease; Immunology; Colorectal cancer; Cancer","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004552391,0.0002743045,0.0003462325,0.0007480864,0.0003770528,0.0004937412,0.0002064142,0.0004793071,0.003964081],"category_scores_gemma":[0.001308532,0.0001726181,0.0006870489,0.0008524497,0.0001583897,0.0003165151,0.00038374,0.0005419006,0.0003197512],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001329256,"about_ca_system_score_gemma":0.0001606656,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001567154,"about_ca_topic_score_gemma":0.001656073,"domain_scores_codex":[0.9996638,0.00009402181,0.00004733213,0.00008252808,0.00005085799,0.00006145044],"domain_scores_gemma":[0.9991264,0.0002282207,0.0002797649,0.00004943609,0.0001081177,0.000207996],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0007065116,0.00004867427,0.9965964,0.00002938845,0.0001275593,0.000111743,0.00004213717,0.00002874221,0.00065481,0.00001572888,0.0001162808,0.001522035],"study_design_scores_gemma":[0.00001559073,0.000203595,0.998588,0.00001115387,0.0001133979,0.0002303863,0.0001652873,0.000326716,0.00008050552,0.00003110458,0.0002306989,0.000003565391],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983026,0.0004947798,0.0001087946,0.00005311939,0.00001745513,0.000006938168,0.0003109485,0.000004676364,0.0007006503],"genre_scores_gemma":[0.9993607,0.00006646176,0.0000896869,0.00001395223,0.00001044364,0.000008118001,0.0002093345,0.000001409065,0.0002398068],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003964081,"threshold_uncertainty_score":0.01326114,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004369512513807654,"score_gpt":0.2095336601532269,"score_spread":0.2051641476394193,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}