{"id":"W2922490134","doi":"10.1111/ppa.13015","title":"Improved detection and identification of the sudden oak death pathogen <i>Phytophthora ramorum</i> and the Port Orford cedar root pathogen <i>Phytophthora lateralis</i>","year":2019,"lang":"en","type":"article","venue":"Plant Pathology","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":22,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval; Natural Resources Canada; FPInnovations; Canadian Forest Service; Canadian Food Inspection Agency; Biopterre; University of British Columbia","funders":"Natural Resources Canada; FPInnovations; Canadian Food Inspection Agency; Genome Canada","keywords":"Phytophthora ramorum; Biology; Phytophthora; Primer (cosmetics); Genome; Polymerase chain reaction; Oomycete; TaqMan; Pathogen; Genetics; Gene; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001567854,0.0007864622,0.0004691093,0.0007538472,0.0001747577,0.0005909621,0.0005743185,0.0009416357,0.001177933],"category_scores_gemma":[0.001138936,0.0003692587,0.0005725567,0.0002327476,0.0003708776,0.0004720717,0.0004499489,0.001075015,0.0007567627],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002648381,"about_ca_system_score_gemma":0.0003311182,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008489787,"about_ca_topic_score_gemma":0.00273104,"domain_scores_codex":[0.9981864,0.0002571023,0.00007442251,0.0005965591,0.0006928256,0.0001927547],"domain_scores_gemma":[0.999001,0.0003595036,0.0002659796,0.00007183958,0.000216724,0.00008497659],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001716684,0.00002414408,0.0007892937,0.00003278583,0.00000384508,0.00001368791,0.00002192712,0.00005977058,0.9959044,0.00004528238,0.00001912391,0.003068679],"study_design_scores_gemma":[0.00001420444,0.0005798562,0.02518215,0.00002954993,0.00004451072,0.0004386218,0.000062458,0.003743248,0.9660908,0.00009562878,0.003692276,0.00002686349],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8338487,0.003925161,0.1546744,0.0002846055,0.0001045643,0.0005200844,0.00121331,0.001023318,0.004405847],"genre_scores_gemma":[0.7403806,0.001365029,0.2495328,0.000282148,0.00004808054,0.0002722356,0.002230986,0.00008840935,0.00579967],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001567854,"threshold_uncertainty_score":0.008291721,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007254017119935804,"score_gpt":0.182283953377833,"score_spread":0.1750299362578972,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}