{"id":"W2923550135","doi":"10.1080/15592294.2019.1588685","title":"Locus-specific DNA methylation prediction in cord blood and placenta","year":2019,"lang":"en","type":"article","venue":"Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université du Québec à Chicoutimi; Université de Sherbrooke; Centre Hospitalier Universitaire de Sherbrooke","funders":"National Institute of Environmental Health Sciences; Fundamental Research Funds for the Central Universities; National Natural Science Foundation of China","keywords":"Biology; DNA methylation; Placenta; Cord blood; Locus (genetics); Genetics; Methylation; DNA; Computational biology; Gene; Andrology; Evolutionary biology; Pregnancy; Fetus; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000798744,0.0004147468,0.0005237847,0.0006293716,0.0001504088,0.0004008076,0.0003478764,0.0003331006,0.001141133],"category_scores_gemma":[0.003514969,0.0001861203,0.0004229546,0.0006365988,0.0001135616,0.0001925368,0.0003349993,0.000498793,0.0003920556],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002683321,"about_ca_system_score_gemma":0.0004767849,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.007300922,"about_ca_topic_score_gemma":0.005361912,"domain_scores_codex":[0.9996989,0.00009381435,0.00001583045,0.0001306757,0.00003524694,0.00002554733],"domain_scores_gemma":[0.9991597,0.0004219184,0.0001817913,0.00008270725,0.0001064394,0.00004746887],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.001835761,0.0001200372,0.7123443,0.0002293183,0.000364792,0.000772507,0.0002096531,0.0918749,0.04838432,0.0009729392,0.002433148,0.1404583],"study_design_scores_gemma":[0.00005906715,0.0002732713,0.1996979,0.0000586981,0.0001902771,0.0007428923,0.0000968189,0.7615874,0.03099083,0.003029151,0.003233256,0.00004031692],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9102871,0.001466722,0.08267744,0.0001781837,0.00002857358,0.00004088217,0.003757617,0.0004377646,0.001125762],"genre_scores_gemma":[0.9735118,0.0003392825,0.02217623,0.00003714813,0.00001163353,0.00002909829,0.003106007,0.00003069876,0.0007581742],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007300922,"threshold_uncertainty_score":0.01451683,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0092788131498165,"score_gpt":0.2323402204617556,"score_spread":0.2230614073119391,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}