{"id":"W2923704743","doi":"10.1007/s00248-019-01361-3","title":"Lower Respiratory Tract Microbiome and Resistome of Bovine Respiratory Disease Mortalities","year":2019,"lang":"en","type":"article","venue":"Microbial Ecology","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":72,"is_retracted":false,"has_abstract":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Alberta Livestock and Meat Agency","keywords":"Biology; Bovine respiratory disease; Resistome; Microbiome; Microbiology; Metagenomics; Antibiotic resistance; Antibiotics; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003828014,0.0002067879,0.0002811859,0.0004713165,0.000392886,0.0007695517,0.0001334777,0.0003841021,0.001640851],"category_scores_gemma":[0.0009354046,0.0001332878,0.0001796149,0.0002971108,0.0003050489,0.0002968676,0.0005385343,0.0004855141,0.0001634203],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003396436,"about_ca_system_score_gemma":0.0002040998,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002622521,"about_ca_topic_score_gemma":0.003341743,"domain_scores_codex":[0.9996634,0.00006213357,0.00002184445,0.00007750004,0.0000634492,0.0001118025],"domain_scores_gemma":[0.9995376,0.000061876,0.0002365874,0.00002352172,0.00005106277,0.00008927623],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001443167,0.0001249355,0.806713,0.00008934241,0.0001201387,0.0001634082,0.0006809409,0.0001496736,0.1814042,0.0001309869,0.0001915878,0.008788615],"study_design_scores_gemma":[0.000002863869,0.0001534958,0.9965966,0.00001180189,0.00002163553,0.0001533283,0.000443829,0.0001857375,0.001915201,0.00005536922,0.000456123,0.000004047105],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9990718,0.0002761004,0.00007946136,0.00005265561,0.000003742817,0.000002579217,0.0002035942,0.000002509784,0.0003074811],"genre_scores_gemma":[0.9990538,0.0001463983,0.00008230603,0.00004407701,0.000006083877,0.000004969017,0.0002568165,0.000001751473,0.0004038929],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002622521,"threshold_uncertainty_score":0.00548923,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01472827907095576,"score_gpt":0.2620711923724516,"score_spread":0.2473429133014958,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}