{"id":"W2925548359","doi":"10.1093/cid/ciz252","title":"Blood Transcriptomic Stratification of Short-term Risk in Contacts of Tuberculosis","year":2019,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":86,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity","funders":"Rosetrees Trust; Medical Research Council; British Lung Foundation; National Institute for Health and Care Research; University College London; Wellcome Trust","keywords":"Medicine; Risk stratification; Tuberculosis; Stratification (seeds); Term (time); Internal medicine; Pathology; Biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000647927,0.0001297647,0.0008357232,0.0001640248,0.00001565503,0.000004013486,0.0000922137,0.000184917,0.0002735099],"category_scores_gemma":[0.002155781,0.0001084622,0.000382887,0.0002157271,0.0002181615,0.0000752521,0.00002023716,0.0003357243,0.000031488],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002797068,"about_ca_system_score_gemma":0.0001636833,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002732487,"about_ca_topic_score_gemma":0.0002257216,"domain_scores_codex":[0.9976748,0.0004622937,0.001097433,0.0003320023,0.0001827925,0.0002506721],"domain_scores_gemma":[0.9977031,0.001275514,0.0001813157,0.0004363473,0.0001450994,0.0002585858],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002942312,0.002442615,0.9844374,0.0002689556,0.0002803239,0.000005996439,0.0000286837,0.00001968186,0.008157049,0.000207463,0.0001324917,0.003725076],"study_design_scores_gemma":[0.002474811,0.001664743,0.9931523,0.0001367896,0.000399205,0.000003654429,0.00002906639,0.0002287785,0.001414781,0.0003782584,0.00002972938,0.00008789335],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971018,0.0006024161,0.00001570614,0.0001895028,0.0001488059,0.0006218544,0.00008563085,0.00003172062,0.001202578],"genre_scores_gemma":[0.9976518,0.00199433,0.00001174882,0.0001439622,0.00006915364,0.00002679549,0.00006283862,0.00001462191,0.00002480735],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008714858,"threshold_uncertainty_score":0.4422959,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03949745295027327,"score_gpt":0.3813400005238844,"score_spread":0.3418425475736112,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}