{"id":"W2926134246","doi":"10.3389/fmicb.2019.00703","title":"Genome and Environmental Activity of a Chrysochromulina parva Virus and Its Virophages","year":2019,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":52,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Gordon and Betty Moore Foundation; National Institutes of Health; Universities Space Research Association; National Science Foundation","keywords":"Biology; Genome; Virus; Genetics; Evolutionary biology; Virology; Computational biology; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000124915,0.0001010276,0.0002585333,0.0000213043,0.00004457688,0.000005574651,0.0001034944,0.00009211184,0.00007453175],"category_scores_gemma":[0.00001423894,0.00004464946,0.00002177297,0.00006038805,0.0001841717,0.00005606512,0.0001882743,0.0001067167,0.000009614418],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002319877,"about_ca_system_score_gemma":0.000002535928,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004915035,"about_ca_topic_score_gemma":0.00006270689,"domain_scores_codex":[0.9992903,0.00009587032,0.000103364,0.0002512075,0.00003260665,0.0002266725],"domain_scores_gemma":[0.9998035,0.00008011641,0.0000480949,0.00002947565,0.00000415935,0.00003469247],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00006410838,0.00003879112,0.02308506,0.00001121028,0.00001959669,0.000003705264,0.00006011516,4.575236e-7,0.9737234,0.000001883449,0.0001090511,0.002882655],"study_design_scores_gemma":[0.0004451488,0.0004906164,0.7353451,0.00001391076,0.000007655591,0.00002635747,0.0002898916,0.00007078888,0.253081,0.0000561002,0.009959066,0.0002143895],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9934846,0.005324613,8.519715e-7,0.00009014615,0.00006940914,0.0002072036,0.0007810168,0.000006004541,0.00003618074],"genre_scores_gemma":[0.9961076,0.003603837,0.0000621787,0.00002683498,0.00001702363,0.000005072609,0.00004899057,6.255332e-7,0.0001278188],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7206423,"threshold_uncertainty_score":0.1820752,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009607849567662405,"score_gpt":0.2029617778859753,"score_spread":0.1933539283183129,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}