{"id":"W2926155048","doi":"10.1093/gigascience/giz019","title":"<i>De novo</i> genome assembly of the white-spotted flower chafer (<i>Protaetia brevitarsis</i>)","year":2019,"lang":"en","type":"article","venue":"GigaScience","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Key Research and Development Program of China; National Natural Science Foundation of China","keywords":"Genome; Biology; Sequence assembly; Metis; Gene; Computational biology; Genetics; World Wide Web; Gene expression; Computer science","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000315937,0.000129174,0.0001424156,0.00001984784,0.00009756212,0.00001873765,0.000588936,0.00006798637,0.00002842766],"category_scores_gemma":[0.00004130902,0.0000939966,0.0001132084,0.0001935915,0.0001636283,0.000001377116,0.0003466464,0.00006511555,0.00002059031],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001083167,"about_ca_system_score_gemma":0.0001070406,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000007634287,"about_ca_topic_score_gemma":0.00001352136,"domain_scores_codex":[0.9989522,0.00003732281,0.00017304,0.0003337802,0.0001722836,0.0003313916],"domain_scores_gemma":[0.9991893,0.000007850605,0.00008671017,0.0005713589,0.00009278442,0.00005204403],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001058159,0.00002246549,0.02566092,0.00001087216,0.00001432674,2.154285e-7,0.000117392,0.0003122079,0.9734955,0.00005854983,0.0001457371,0.0001511968],"study_design_scores_gemma":[0.0004589292,0.0002035189,0.3924488,0.00002103084,0.00002400539,0.00002026845,0.0001279666,0.00006384938,0.5611795,0.00006376098,0.04508416,0.0003042114],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9949583,0.0006961795,0.0001503695,0.0003159383,0.0002944205,0.000266764,0.0000225631,0.000002510781,0.003292956],"genre_scores_gemma":[0.9971442,0.00008077511,0.0004826177,0.0007429566,0.00006762606,0.00001233754,0.000002714156,0.00001178294,0.001454939],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4123161,"threshold_uncertainty_score":0.383307,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005996281471931252,"score_gpt":0.203950746702157,"score_spread":0.1979544652302257,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}