{"id":"W2926237638","doi":"10.1111/liv.14106","title":"Faecal microbiota from patients with cirrhosis has a low capacity to ferment non‐digestible carbohydrates into short‐chain fatty acids","year":2019,"lang":"en","type":"article","venue":"Liver International","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":176,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"China Scholarship Council; National Natural Science Foundation of China; University of Alberta","keywords":"Lactulose; Dysbiosis; Butyrate; Ruminococcus; Prebiotic; Gut flora; Lachnospiraceae; Cirrhosis; Resistant starch; Arabinoxylan; Internal medicine; Food science; Biology; Gastroenterology; Eubacterium; Feces; Microbiome; Short-chain fatty acid; Fatty liver; Microbiology; Medicine; Fermentation; Biochemistry; Bacteria; Firmicutes; Disease; Polysaccharide; 16S ribosomal RNA; Starch; Gene; Bioinformatics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005495086,0.0001984787,0.0001567877,0.00005852559,0.00007527938,0.00007046756,0.000318867,0.0001354895,0.0002077654],"category_scores_gemma":[0.0000104149,0.0001790064,0.00006430098,0.00006743109,0.00005599859,0.000009920192,0.0001920656,0.0001164017,0.0001809477],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001096226,"about_ca_system_score_gemma":0.00007803628,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009931874,"about_ca_topic_score_gemma":0.0003781517,"domain_scores_codex":[0.9988508,0.00002673757,0.0001946465,0.000492348,0.0001838514,0.0002515918],"domain_scores_gemma":[0.9993465,0.000009248212,0.00005306697,0.0002770144,0.0001828576,0.0001313323],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000145834,0.0001690261,0.2744059,0.00001178606,0.0001053689,0.000001494926,0.000341246,0.00005635867,0.723543,0.00001640748,0.001026326,0.0001771747],"study_design_scores_gemma":[0.0009830397,0.000454272,0.7371374,0.00007170917,0.00001840784,0.000002339871,0.00003935474,0.0001303002,0.2538584,0.00001558398,0.006960798,0.0003283893],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975214,0.00002929951,0.0005857665,0.0003347732,0.0004663659,0.0003812448,0.0003169118,0.00001154507,0.0003526937],"genre_scores_gemma":[0.9948513,0.00001081153,0.002667045,0.0008808624,0.0001624591,0.00002041883,0.000997982,0.00002302202,0.0003861242],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4696847,"threshold_uncertainty_score":0.7299668,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007809266117642573,"score_gpt":0.2142317105140475,"score_spread":0.206422444396405,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}