{"id":"W2927244682","doi":"10.1016/j.jtbi.2019.04.002","title":"Testing the rogue taxa hypothesis for clustering instability","year":2019,"lang":"en","type":"article","venue":"Journal of Theoretical Biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Cluster analysis; Taxon; Instability; Biology; Evolutionary biology; Ecology; Mathematics; Statistics; Physics; Mechanics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.015304,0.0006894068,0.001424923,0.00277396,0.002561831,0.004177522,0.003427274,0.003258109,0.01095016],"category_scores_gemma":[0.1416228,0.000491806,0.001578007,0.001780499,0.00500082,0.005662858,0.004001779,0.002850476,0.0008099145],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001272025,"about_ca_system_score_gemma":0.001154063,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001232802,"about_ca_topic_score_gemma":0.0007059103,"domain_scores_codex":[0.9890132,0.005509784,0.0005181427,0.002578081,0.001578261,0.0008025431],"domain_scores_gemma":[0.7895061,0.1671792,0.01536849,0.01638482,0.005414618,0.006146876],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.007053759,0.0007900641,0.609564,0.0005496606,0.003486329,0.003330929,0.004515392,0.04200511,0.03128941,0.2341673,0.003867355,0.05938064],"study_design_scores_gemma":[0.001218822,0.001899475,0.1607661,0.000116492,0.001346405,0.004089571,0.009770563,0.4120055,0.01217736,0.3931578,0.003157633,0.0002942912],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.969536,0.0001360126,0.02293328,0.001746863,0.00006230277,0.00003638336,0.0001993095,0.00009233403,0.005257524],"genre_scores_gemma":[0.9973044,0.0000171847,0.002213514,0.0001130368,0.00003707483,0.00001224806,0.00009775455,0.00002010751,0.0001846495],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.015304,"threshold_uncertainty_score":0.08093625,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02250576015693511,"score_gpt":0.2536484133993904,"score_spread":0.2311426532424553,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}