{"id":"W2928101672","doi":"10.1186/s12985-019-1137-5","title":"The Epstein-Barr virus EBNA1 protein modulates the alternative splicing of cellular genes","year":2019,"lang":"en","type":"article","venue":"Virology Journal","topic":"Viral-associated cancers and disorders","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; National Cancer Institute; Sleep Research Society Foundation","keywords":"Biology; RNA splicing; Alternative splicing; Gene; Immunoprecipitation; RNA; RNA-binding protein; Gene expression; Messenger RNA; Cell biology; Genetics; Computational biology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006222915,0.000134135,0.0002709279,0.00005843512,0.0002889851,0.00002376462,0.0002364048,0.0001101348,0.0001678447],"category_scores_gemma":[0.0000590412,0.00006785717,0.0001587127,0.0001057718,0.0001898085,0.00005034762,0.00004551923,0.0005218347,0.00004486048],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006325157,"about_ca_system_score_gemma":0.0001148798,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001580805,"about_ca_topic_score_gemma":0.00003375267,"domain_scores_codex":[0.9987758,0.0001662382,0.0003319931,0.0001446754,0.0002582571,0.0003230461],"domain_scores_gemma":[0.9991075,0.0001006794,0.0003586109,0.0002522486,0.0001121416,0.00006886794],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006378266,0.00007171351,0.01511665,0.00001760737,0.0004582538,0.00003963465,0.0008937035,0.001176345,0.9732951,0.0007659192,0.0005555155,0.006971729],"study_design_scores_gemma":[0.02004979,0.006818516,0.04990379,0.0004533282,0.0008479531,0.0008982987,0.006780401,0.01753743,0.820846,0.03256448,0.04248783,0.0008121702],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9878931,0.004369838,0.0002004912,0.005258569,0.0003579821,0.0004341245,0.000002961901,0.00001017476,0.001472738],"genre_scores_gemma":[0.9972741,0.0007511636,0.00003740463,0.0005925525,0.0002334115,0.00001252568,0.000001145781,0.00001955145,0.001078115],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1524491,"threshold_uncertainty_score":0.2767135,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00914904670682596,"score_gpt":0.2422282140511499,"score_spread":0.233079167344324,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}