{"id":"W2928153265","doi":"10.1128/mspheredirect.00157-19","title":"Marine RNA Virus Quasispecies Are Distributed throughout the Oceans","year":2019,"lang":"en","type":"article","venue":"mSphere","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":52,"is_retracted":false,"has_abstract":true,"ca_institutions":"Memorial University of Newfoundland; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Biology; RNA; Viral quasispecies; RNA virus; Viral evolution; Genome; Nonsynonymous substitution; Virus; Biological dispersal; Marine bacteriophage; Genetics; Evolutionary biology; Gene; Population","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005085505,0.0001597691,0.0003882789,0.001047163,0.0006643194,0.0008428045,0.0002008158,0.0002553577,0.0009959048],"category_scores_gemma":[0.00101478,0.000192218,0.0002323246,0.0009379262,0.0004787728,0.0006011546,0.000568027,0.0003299507,0.0002710091],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003818375,"about_ca_system_score_gemma":0.0004044921,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00365445,"about_ca_topic_score_gemma":0.007261929,"domain_scores_codex":[0.9994617,0.0000747348,0.00004173096,0.0002083746,0.0001426682,0.00007084838],"domain_scores_gemma":[0.9991549,0.0001893502,0.0003021153,0.00009531528,0.0001770493,0.0000813965],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000297015,0.00003398848,0.5425303,0.0003852184,0.000271335,0.0001630993,0.001576292,0.0004934014,0.3942368,0.001415578,0.0002860912,0.05831087],"study_design_scores_gemma":[0.000007346217,0.0001781456,0.9724342,0.00007423294,0.00007455796,0.0003189681,0.001436628,0.0007793852,0.01222119,0.001415401,0.01103332,0.00002667891],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9910578,0.003614614,0.002549921,0.00009641544,0.00001566588,0.00001165642,0.0005423579,0.00003631724,0.002075345],"genre_scores_gemma":[0.9952815,0.001259235,0.002177777,0.0000632626,0.00001238792,0.00001402434,0.0006391454,0.00001620195,0.000536512],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00365445,"threshold_uncertainty_score":0.007266343,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00811958421851627,"score_gpt":0.2341864907481138,"score_spread":0.2260669065295975,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}