{"id":"W2929505681","doi":"10.1038/s41598-019-39276-1","title":"Insights into the antigenic advancement of influenza A(H3N2) viruses, 2011–2018","year":2019,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":86,"is_retracted":false,"has_abstract":true,"ca_institutions":"Advantage Forensics (Canada)","funders":"Centers for Disease Control and Prevention","keywords":"Virology; Biology; Antigen; Antiserum; Antigenic drift; Epitope; Virus; Hemagglutination assay; Clade; Neutralization; Antigenic variation; Influenza A virus; Original antigenic sin; Microbiology; Gene; Genetics; Phylogenetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001315671,0.0002002627,0.0004128764,0.000289314,0.0003459079,0.00006839403,0.0002247291,0.00006874193,0.000646285],"category_scores_gemma":[0.0003722374,0.0001212401,0.0001708594,0.0005845544,0.0008109303,0.0002366659,0.0003374302,0.0002181178,0.0007499174],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001376916,"about_ca_system_score_gemma":0.0004492657,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002239045,"about_ca_topic_score_gemma":0.00006322075,"domain_scores_codex":[0.9965005,0.00006808672,0.000821014,0.0007137547,0.001465599,0.0004310684],"domain_scores_gemma":[0.9967967,0.00007951285,0.0004117541,0.001968154,0.0006022587,0.0001416671],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003098515,0.0004308621,0.1638895,0.0005197238,0.0004458369,0.0003645956,0.008090454,0.0001344203,0.7772003,0.0009305957,0.03997312,0.007710751],"study_design_scores_gemma":[0.0004902632,0.0001764616,0.01806222,0.000128451,0.0000450765,0.00003260251,0.0004023642,0.00003883529,0.1211113,0.001466824,0.8578957,0.0001499551],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9822963,0.006754337,0.00002742711,0.0002504707,0.003732141,0.00119895,0.000001220455,0.0000479094,0.005691205],"genre_scores_gemma":[0.9888073,0.0001851619,0.0003848851,0.0006129569,0.00009585379,0.00004905972,0.000009547911,0.00002676177,0.009828465],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8179225,"threshold_uncertainty_score":0.963892,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0601421324838983,"score_gpt":0.3674340931853237,"score_spread":0.3072919607014254,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}