{"id":"W2929513890","doi":"10.1038/s41598-019-41958-9","title":"Linking morphological and molecular taxonomy for the identification of poultry house, soil, and nest dwelling mites in the Western Palearctic","year":2019,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Study of Mite Species","field":"Agricultural and Biological Sciences","cited_by":20,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada; European Cooperation in Science and Technology","keywords":"Biology; DNA barcoding; Barcode; Intraspecific competition; Taxon; Nest (protein structural motif); Acari; Taxonomy (biology); Ecology; Invertebrate; Identification (biology); Species complex; Zoology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001837798,0.00008361739,0.000123396,0.00001799771,0.0002362373,0.000276992,0.0001744679,0.00004844122,0.00001343831],"category_scores_gemma":[0.0001168575,0.000026375,0.00004643754,0.0002452172,0.0002576579,0.00008728931,0.00006724949,0.0000810972,0.000002850271],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005364498,"about_ca_system_score_gemma":0.000005233872,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006412293,"about_ca_topic_score_gemma":0.00008379684,"domain_scores_codex":[0.9988166,0.00005484421,0.0003381523,0.0003976932,0.0002321172,0.0001605578],"domain_scores_gemma":[0.9990523,0.0004812168,0.000230836,0.0001526731,0.00006184832,0.000021098],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000005496745,0.00003287199,0.7465075,0.00001680062,0.00000509112,0.00001170938,0.0003152336,0.00004417927,0.2482019,0.00004014865,0.0001235641,0.004695536],"study_design_scores_gemma":[0.0001143639,0.00009138417,0.968312,0.00004842288,0.00002607609,0.0001749313,0.004539673,0.0003506895,0.008613486,0.002138732,0.01543327,0.0001569741],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9968961,0.0006723829,0.00002506388,0.001224271,0.0003837198,0.0007424635,0.000001738713,0.00001416055,0.00004006057],"genre_scores_gemma":[0.9995384,0.00002086818,0.00005697212,0.00009024254,0.00003949744,0.00004629626,0.000007173034,0.000001050047,0.0001995552],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2395884,"threshold_uncertainty_score":0.267104,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0312135679414106,"score_gpt":0.2283105039026161,"score_spread":0.1970969359612054,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}