{"id":"W2931789083","doi":"10.1186/s12934-019-1093-1","title":"Optimization of secretion and surface localization of heterologous OVA protein in mycobacteria by using LipY as a carrier","year":2019,"lang":"en","type":"article","venue":"Microbial Cell Factories","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity","funders":"Nederlandse Organisatie voor Wetenschappelijk Onderzoek","keywords":"Heterologous; Secretion; Biology; Antigen; Mycobacterium bovis; Fusion protein; Epitope; Microbiology; Ovalbumin; Recombinant DNA; Cell biology; Mycobacterium tuberculosis; Biochemistry; Immunology; Tuberculosis","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001609074,0.0001020389,0.000338975,0.00006990853,0.00001738441,0.000006427013,0.00003502606,0.0001609138,0.0001329682],"category_scores_gemma":[0.0001152493,0.00009303233,0.00003023042,0.0001360556,0.00009754203,0.00008891401,0.00003440211,0.0001009769,0.000001643851],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005746422,"about_ca_system_score_gemma":0.00006867561,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001322666,"about_ca_topic_score_gemma":0.00003344745,"domain_scores_codex":[0.9991043,0.0001413091,0.0003040435,0.0001814607,0.00008973935,0.0001791419],"domain_scores_gemma":[0.9995506,0.00003757049,0.0001241161,0.0001221666,0.0001134405,0.0000521278],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004438126,0.0000437404,0.0965215,0.0002854809,0.00001228006,8.137109e-7,0.0004467122,0.004982346,0.8971711,0.000005033476,0.00006005478,0.00002708911],"study_design_scores_gemma":[0.001678888,0.0008032483,0.00443801,0.0001648379,0.00002420416,0.00001126895,0.0001999986,0.01096541,0.980482,0.00001473885,0.001080268,0.0001371121],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975593,0.0002113127,0.001477749,0.00005448238,0.00006982315,0.0005149546,0.00004869656,0.000008431234,0.00005521803],"genre_scores_gemma":[0.9988581,0.00008073837,0.0006897165,0.00004239053,0.00001641898,0.000001736594,0.0001948086,0.00001321494,0.0001029019],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09208349,"threshold_uncertainty_score":0.3793748,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.010970692219854,"score_gpt":0.2622941647838757,"score_spread":0.2513234725640218,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}