{"id":"W2935090374","doi":"10.1016/j.rbmo.2019.03.213","title":"Triggering method in assisted reproduction alters the cumulus cell transcriptome","year":2019,"lang":"en","type":"article","venue":"Reproductive BioMedicine Online","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"ca_institutions":"Women's College Hospital; University of Toronto; CReATe Fertility Centre","funders":"Roche","keywords":"Oocyte; Transcriptome; Hormone antagonist; Andrology; Ovarian reserve; Biology; Medicine; Internal medicine; Hormone; Endocrinology; Infertility; Cell biology; Pregnancy; Genetics; Embryo; Gene; Gene expression; Endocrine system","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.003649808,0.0004012435,0.0009090248,0.0004628487,0.000100444,0.000009904361,0.0002541492,0.0002133154,0.0001502914],"category_scores_gemma":[0.0009424989,0.0002549917,0.0002166922,0.001613058,0.0004392111,0.0001845282,0.00007378133,0.0008742822,0.00009435878],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002942376,"about_ca_system_score_gemma":0.0001708804,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001809182,"about_ca_topic_score_gemma":0.00001334618,"domain_scores_codex":[0.9954039,0.0004727758,0.0008626158,0.002242818,0.0004618876,0.0005559681],"domain_scores_gemma":[0.9965901,0.000147009,0.0002654272,0.0025047,0.0003498397,0.0001429091],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.007381043,0.001948777,0.0308925,0.0003349536,0.000192414,0.0000547766,0.001450673,0.00003867312,0.9163417,0.00003368796,0.0007040342,0.04062682],"study_design_scores_gemma":[0.004145447,0.001156098,0.8977756,0.0001575568,0.0001980002,0.0004696459,0.001556396,0.0003137291,0.05487334,0.0001947167,0.0388249,0.0003345779],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9633717,0.004011352,0.000603614,0.02585469,0.002057716,0.002195183,0.00001931508,0.0001566609,0.001729768],"genre_scores_gemma":[0.9880497,0.0002079139,0.003557364,0.0005153191,0.002053148,0.00005442843,0.0002259908,0.00005163014,0.005284477],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8668831,"threshold_uncertainty_score":0.9999902,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03245668292326025,"score_gpt":0.3373625356233876,"score_spread":0.3049058527001273,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}