{"id":"W2936220680","doi":"10.1186/s12866-018-1380-8","title":"Characterization and complete genome analysis of the surfactin-producing, plant-protecting bacterium Bacillus velezensis 9D-6","year":2019,"lang":"en","type":"article","venue":"BMC Microbiology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":111,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; Western University","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Mitacs","keywords":"Surfactin; Biology; Ralstonia solanacearum; Clavibacter michiganensis; Microbiology; Rhizoctonia solani; Pantoea agglomerans; Alternaria alternata; Fusarium oxysporum; Bacteria; Bacillus subtilis; Botany; Pathogen","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002325193,0.0001252646,0.000303968,0.00003628744,0.0001961767,0.00002607514,0.0002082224,0.00009252768,0.0005873649],"category_scores_gemma":[0.00005022262,0.00004862762,0.0001209471,0.0004027225,0.00006403661,0.00006591246,0.0001511893,0.0001674803,0.00002697666],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002039377,"about_ca_system_score_gemma":0.000008002087,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000700711,"about_ca_topic_score_gemma":0.001603026,"domain_scores_codex":[0.9989791,0.0002459839,0.0002624461,0.0002827883,0.00002922743,0.0002004473],"domain_scores_gemma":[0.9992998,0.000210325,0.0002628151,0.0001339631,0.00006928241,0.000023771],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002928271,0.00001918222,0.05112007,0.000008710661,0.00009787447,1.125092e-7,0.00009315717,0.000008498076,0.9481374,0.00000348519,0.000004971765,0.0004772472],"study_design_scores_gemma":[0.00007585245,0.00006617891,0.9349274,0.0000126841,0.00008292329,0.00004362051,0.000141542,0.0000931187,0.05096771,0.000001113029,0.01346554,0.0001222918],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997998,0.00003076202,0.0000114073,0.0001205866,0.000251844,0.0002199881,0.001307737,0.0000174581,0.00004218849],"genre_scores_gemma":[0.9985697,0.0000200949,0.00004516997,0.0001043334,0.00003447295,0.000002735976,0.0009325731,0.00000105313,0.0002899118],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8971697,"threshold_uncertainty_score":0.6431234,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02231676465445395,"score_gpt":0.1959432889350277,"score_spread":0.1736265242805737,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}