{"id":"W2936809463","doi":"10.1038/s41592-019-0477-9","title":"Gene Information eXtension (GIX): effortless retrieval of gene product information on any website","year":2019,"lang":"en","type":"preprint","venue":"Nature Methods","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Toronto; Institute for Research in Immunology and Cancer; Sinai Health System; Université de Montréal; Lunenfeld-Tanenbaum Research Institute","funders":"National Institutes of Health","keywords":"Computer science; Product (mathematics); Extension (predicate logic); Process (computing); Reading (process); Task (project management); Information retrieval; World Wide Web","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001331906,0.003124257,0.001407054,0.002729959,0.0008291142,0.001764209,0.002380752,0.00180912,0.08302859],"category_scores_gemma":[0.00539446,0.001634474,0.001594061,0.00302777,0.0005656971,0.002135501,0.003243479,0.002239155,0.08480193],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004884646,"about_ca_system_score_gemma":0.0009241368,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001663079,"about_ca_topic_score_gemma":0.00184416,"domain_scores_codex":[0.9991336,0.0001196196,0.00006274327,0.0002496773,0.0002546095,0.0001797117],"domain_scores_gemma":[0.9981062,0.0004199954,0.00007577695,0.001094648,0.0001657556,0.0001375146],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0018301,0.0002777103,0.002325389,0.001060332,0.0002094519,0.0005074839,0.0002533336,0.001318394,0.04561236,0.008381954,0.8221661,0.1160574],"study_design_scores_gemma":[0.001912867,0.0005311741,0.01298824,0.0003627409,0.0002935241,0.002177031,0.000231907,0.05614674,0.2356543,0.04404083,0.6452391,0.0004214213],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"software","genre_gemma":"software","genre_scores_codex":[0.01515898,0.0003912958,0.2079273,0.0005932013,0.0005060714,0.0004471209,0.1844697,0.5763644,0.01414189],"genre_scores_gemma":[0.06529162,0.0005169358,0.285044,0.0006188639,0.0002050296,0.001575151,0.5430793,0.07866352,0.02500557],"genre_candidate":"software","genre_consensus":"software","teacher_disagreement_score":0.08302859,"threshold_uncertainty_score":0.2777583,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01002203071943731,"score_gpt":0.3088775933654034,"score_spread":0.2988555626459661,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}