{"id":"W2936934709","doi":"10.1139/gen-2018-0168","title":"LSU rDNA D5 region: the DNA barcode for molecular classification and identification of <i>Demodex</i>","year":2019,"lang":"en","type":"article","venue":"Genome","topic":"Study of Mite Species","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"China Postdoctoral Science Foundation; National Natural Science Foundation of China","keywords":"Biology; Intraspecific competition; Demodex; Ribosomal DNA; DNA barcoding; Interspecific competition; Internal transcribed spacer; Evolutionary biology; Phylogenetic tree; Ribosomal RNA; Acariformes; Genetics; Zoology; Gene; Botany; Acari; Mite","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001588785,0.00006092156,0.00008800357,0.000005932614,0.00009217497,0.00002742661,0.0001788703,0.00003683216,0.00002832275],"category_scores_gemma":[0.00001969582,0.00002194232,0.00004599302,0.0001061157,0.00005822616,0.00004869058,0.00003272646,0.00003009232,0.00001944076],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000009117379,"about_ca_system_score_gemma":0.000002612476,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001245394,"about_ca_topic_score_gemma":0.00001192143,"domain_scores_codex":[0.999419,0.00002683775,0.0001561963,0.0001838729,0.0001096282,0.0001044507],"domain_scores_gemma":[0.9996353,0.00009139593,0.000105927,0.00008848419,0.00005832165,0.00002052544],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000009319399,0.00001284659,0.001109224,0.000006621352,0.000005884788,5.69297e-8,0.0001135061,0.000003151239,0.9913567,0.002149427,0.0000749542,0.005158267],"study_design_scores_gemma":[0.0001403464,0.0001208348,0.9491472,0.000005314282,0.00001761442,0.000003198938,0.001092617,0.0001904426,0.01361399,0.002258466,0.03329769,0.0001123334],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.994453,0.0004051627,0.00007711323,0.003822393,0.00005859329,0.0004507779,0.00001792445,0.00001491684,0.0007001611],"genre_scores_gemma":[0.9988882,0.00006405209,0.00003835433,0.0001315825,0.00006938026,0.00002457578,0.00002556526,7.730765e-7,0.0007575245],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9777427,"threshold_uncertainty_score":0.08947816,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02509502232318255,"score_gpt":0.212896142718791,"score_spread":0.1878011203956084,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}