{"id":"W2938268077","doi":"10.1097/olq.0000000000001004","title":"Mycoplasma genitalium, Chlamydia trachomatis, and Neisseria gonorrhoeae Detected With Aptima Assays Performed on Self-Obtained Vaginal Swabs and Urine Collected at Home and in a Clinic","year":2019,"lang":"en","type":"article","venue":"Sexually Transmitted Diseases","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University; St. Joseph’s Healthcare Hamilton","funders":"","keywords":"Mycoplasma genitalium; Chlamydia trachomatis; Neisseria gonorrhoeae; Medicine; Gynecology; Gonorrhea; Urine; Sexually transmitted disease; Virology; Microbiology; Internal medicine; Syphilis; Biology; Human immunodeficiency virus (HIV)","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002378846,0.0004334513,0.0005698998,0.0005051324,0.0002819471,0.00007721331,0.0001351652,0.0002625298,0.0006506122],"category_scores_gemma":[0.000127929,0.0003652748,0.00004341437,0.0005857466,0.000371394,0.0002759956,0.00005561222,0.0005176413,0.00009791032],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000109995,"about_ca_system_score_gemma":0.0002245594,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001596325,"about_ca_topic_score_gemma":0.0003909917,"domain_scores_codex":[0.9975039,0.0004289864,0.0004205893,0.0009569863,0.00007267886,0.0006168326],"domain_scores_gemma":[0.9984753,0.000734,0.000104768,0.0004150456,0.0001409763,0.0001298788],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.009356123,0.001169686,0.8926451,0.0003822921,0.0006627407,0.00002638483,0.0009919092,0.0000208425,0.0909278,0.00002198988,0.00007864555,0.003716547],"study_design_scores_gemma":[0.009282364,0.001914438,0.9850326,0.00006828494,0.000181696,0.0004423506,0.000274402,0.0001988146,0.00176487,0.00004438085,0.000319145,0.000476707],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9943871,0.003193998,0.00001115583,0.000108799,0.0001056264,0.001452873,0.0001619253,0.0002102079,0.0003682835],"genre_scores_gemma":[0.9975957,0.0004092201,0.000110941,0.00004365886,0.00001788063,0.0001621025,0.0002023098,0.00005634582,0.001401895],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09238751,"threshold_uncertainty_score":0.9998799,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005980458344442204,"score_gpt":0.2324830658145313,"score_spread":0.2265026074700892,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}