{"id":"W2939150074","doi":"10.1177/1040638719843577","title":"A two-year prospective study of small poultry flocks in Ontario, Canada, part 1: prevalence of viral and bacterial pathogens","year":2019,"lang":"en","type":"article","venue":"Journal of Veterinary Diagnostic Investigation","topic":"Veterinary medicine and infectious diseases","field":"Veterinary","cited_by":30,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph; Ministry of Agriculture, Food and Rural Affairs","funders":"Ontario Ministry of Agriculture, Food and Rural Affairs; University of Guelph","keywords":"Flock; Biosecurity; Mycoplasma synoviae; Veterinary medicine; Biology; Mycoplasma; Infectious bursal disease; Mycoplasma gallisepticum; Influenza A virus subtype H5N1; Poultry farming; Infectious bronchitis virus; Virology; Campylobacter; Newcastle disease; Outbreak; Virus; Virulence; Medicine; Microbiology; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004447626,0.00022075,0.0005512038,0.0002177155,0.00003574898,0.00001278474,0.0001690468,0.00006746316,0.0002764272],"category_scores_gemma":[0.0006597501,0.0002039272,0.00006836059,0.0001513466,0.00009913113,0.0003246765,0.00009722362,0.0003008568,0.000001516671],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002875231,"about_ca_system_score_gemma":0.0008895539,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.2500812,"about_ca_topic_score_gemma":0.08638738,"domain_scores_codex":[0.9978032,0.0003192553,0.001019033,0.0002489786,0.0003941388,0.0002154054],"domain_scores_gemma":[0.9980227,0.0005140309,0.0008064794,0.000240439,0.0002644797,0.0001519089],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001570233,0.0006222447,0.9569848,0.0004160194,0.00008005869,0.0006248364,0.002739856,0.00009349315,0.03667938,0.00001559783,0.00008868099,0.00008481347],"study_design_scores_gemma":[0.003708787,0.03148068,0.9594432,0.0009639822,0.0001469063,0.0009901815,0.002581213,0.000026772,0.0003360514,0.0001018933,0.00003692185,0.000183476],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981585,0.0001012349,0.000001811633,0.00002168973,0.0007242656,0.0007459923,0.00003813221,0.000006223959,0.0002021654],"genre_scores_gemma":[0.9995198,0.00003214972,0.000186012,0.00003309561,0.0001441973,0.00002082711,0.000007239069,0.00002000446,0.00003666925],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1636938,"threshold_uncertainty_score":0.9302837,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03207192768244523,"score_gpt":0.2650947767349529,"score_spread":0.2330228490525077,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}