{"id":"W2939306314","doi":"10.3389/fcimb.2019.00112","title":"Dysbiosis of the Gut Microbiome in Lung Cancer","year":2019,"lang":"en","type":"article","venue":"Frontiers in Cellular and Infection Microbiology","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":244,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"","keywords":"Dysbiosis; Microbiome; Actinobacteria; Bifidobacterium; Biology; Gut flora; Lung cancer; Phylum; Cancer; Pathogenesis; Colorectal cancer; Immunology; Microbiology; Medicine; Internal medicine; Bacteria; 16S ribosomal RNA; Bioinformatics; Genetics; Lactobacillus","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001788755,0.0001287012,0.0002253689,0.0001371448,0.0000328688,0.000005048869,0.0001088976,0.0002635141,0.0000361956],"category_scores_gemma":[0.000008780744,0.0001057302,0.00007041309,0.0001960546,0.0001211633,0.00000444762,0.0001013861,0.0001527851,0.000002158197],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005000027,"about_ca_system_score_gemma":0.00007182275,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004138843,"about_ca_topic_score_gemma":0.0003193891,"domain_scores_codex":[0.9990542,0.000123488,0.0002629645,0.000301106,0.00001678524,0.0002414542],"domain_scores_gemma":[0.999628,0.000004789801,0.0001013602,0.0002148809,0.00002796708,0.0000230037],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002186574,0.00002851603,0.4285214,0.0000566104,0.00001319505,1.518292e-7,0.00003782625,0.00002015648,0.5690899,0.0000061297,0.002075574,0.0001286958],"study_design_scores_gemma":[0.002086091,0.0001679706,0.1986267,0.0001096325,0.00002224602,0.00002640206,0.00006829305,0.00008714011,0.7372174,0.00002903846,0.06126003,0.0002990112],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9935533,0.00416305,0.0002369019,0.0001373189,0.001377369,0.0003310928,0.00003188496,0.000003224511,0.0001658302],"genre_scores_gemma":[0.9975016,0.001417295,0.0001806377,0.0002510312,0.00003887925,0.00001070606,0.00005415591,0.00001215684,0.0005336149],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2298946,"threshold_uncertainty_score":0.4311551,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003027655606747606,"score_gpt":0.2200335907183448,"score_spread":0.2170059351115972,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}