{"id":"W2940182793","doi":"10.3390/jof5020032","title":"Clonal Dispersal of Cryptococcus gattii VGII in an Endemic Region of Cryptococcosis in Colombia","year":2019,"lang":"en","type":"article","venue":"Journal of Fungi","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Cryptococcus gattii; Biology; Virulence; Multilocus sequence typing; Cryptococcosis; Outbreak; Genotype; Mating type; Phenotype; Biological dispersal; Zoology; Genetics; Microbiology; Virology; Gene; Population","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003915063,0.000106757,0.000596099,0.0004208634,0.00001349878,0.000004061007,0.00008332623,0.00009790598,0.0001243532],"category_scores_gemma":[0.00009351964,0.00008476675,0.0001607805,0.0003254284,0.00005983948,0.0001532425,0.00002660891,0.0003536076,0.000004132163],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001207601,"about_ca_system_score_gemma":0.0001233701,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001076171,"about_ca_topic_score_gemma":0.0001387161,"domain_scores_codex":[0.9986677,0.00006661352,0.0007434868,0.0001064575,0.0002532019,0.0001625167],"domain_scores_gemma":[0.9989917,0.0001436602,0.0004028198,0.0001485722,0.0002397952,0.00007351373],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000826074,0.0005880905,0.908749,0.0001313678,0.00006842775,0.00005772346,0.000701711,0.00008031225,0.0857136,0.000242404,0.001118883,0.001722344],"study_design_scores_gemma":[0.003379548,0.003104241,0.9856794,0.0007928595,0.00006671381,0.0001694679,0.0009112266,0.0003574601,0.004461428,0.0001202918,0.0008585599,0.00009878163],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970214,0.001019607,0.0000237717,0.0002434623,0.0002464891,0.0002892598,0.000003787855,0.000003105891,0.0011491],"genre_scores_gemma":[0.9990609,0.0003607168,0.0003404872,0.00004977685,0.00009283354,0.000004575717,0.000001127158,0.00001023983,0.00007932278],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08125217,"threshold_uncertainty_score":0.3456688,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02133971405378354,"score_gpt":0.2960480427798992,"score_spread":0.2747083287261156,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}