{"id":"W2940347290","doi":"10.1128/mra.00133-19","title":"The Mastitis Pathogens Culture Collection","year":2019,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Milk Quality and Mastitis in Dairy Cows","field":"Agricultural and Biological Sciences","cited_by":78,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal","funders":"Fonds de recherche du Québec – Nature et technologies; Natural Sciences and Engineering Research Council of Canada; Government of Canada; Université de Montréal; University of Guelph","keywords":"Mastitis; Pathogen; Veterinary medicine; Milk production; Biology; Mammary gland; Cohort; Microbiological culture; Animal science; Microbiology; Medicine; Bacteria; Internal medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003068216,0.000141969,0.0001409137,0.000007019327,0.0006285509,0.00005652626,0.0003526615,0.0001526112,0.0006338913],"category_scores_gemma":[0.00003172475,0.00004782064,0.00008193316,0.0002292805,0.0001112755,0.00004592599,0.0001313287,0.0001623097,0.0006461474],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003924837,"about_ca_system_score_gemma":0.00000768515,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004522942,"about_ca_topic_score_gemma":0.0004057163,"domain_scores_codex":[0.998849,0.0001779414,0.0002105755,0.0003119159,0.00007927515,0.0003713121],"domain_scores_gemma":[0.9995824,0.0001134831,0.00009436001,0.000104077,0.00006018992,0.00004552333],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000059677,0.00003393972,0.00698697,0.000002973733,0.00002441777,0.000002170198,0.0001274998,0.000008258691,0.9170756,0.0002100494,0.06981818,0.005650236],"study_design_scores_gemma":[0.0001920305,0.0002783386,0.001932932,0.0000125337,0.000006352743,0.00003122733,0.0005215,0.0000051911,0.0004284207,0.000104724,0.9963533,0.0001334799],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9869078,0.000463734,0.000003278442,0.001294582,0.0004072948,0.0003832945,0.0007464009,0.00006718642,0.009726403],"genre_scores_gemma":[0.8562781,0.0006566499,0.00008654768,0.00448302,0.0006560322,0.00009165277,0.006326909,0.00000418468,0.131417],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9265351,"threshold_uncertainty_score":0.8305132,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00937919700516923,"score_gpt":0.1997653281889955,"score_spread":0.1903861311838263,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}