{"id":"W2940732275","doi":"10.1146/annurev-immunol-042718-041841","title":"Gut Microbiota Regulation of T Cells During Inflammation and Autoimmunity","year":2019,"lang":"en","type":"review","venue":"Annual Review of Immunology","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":321,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Canadian Institutes of Health Research; National Institutes of Health; Crohn's and Colitis Foundation","keywords":"Biology; Autoimmunity; Immune system; Immunology; Inflammation; Immunity; Acquired immune system; Gut flora; Innate lymphoid cell; Innate immune system; Homeostasis; Cell biology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003746321,0.0002860336,0.001545068,0.0001139477,0.00004017773,0.000003291505,0.0002702856,0.0005016288,0.00003209632],"category_scores_gemma":[0.00008722698,0.000250405,0.0003007744,0.0001349542,0.0001705917,0.000006293007,0.0002814757,0.000222259,0.00002105837],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002477913,"about_ca_system_score_gemma":0.0002821011,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002118236,"about_ca_topic_score_gemma":0.000002553539,"domain_scores_codex":[0.9980211,0.0003599167,0.0010389,0.000313531,0.00005845098,0.0002080939],"domain_scores_gemma":[0.9978976,0.00003121505,0.001154701,0.0006733101,0.0002192881,0.00002390115],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00001157904,0.00002296821,0.000001077445,0.221177,0.0001849691,2.470463e-7,0.00002746447,8.278514e-8,0.5013641,0.00004276788,0.0003013574,0.2768665],"study_design_scores_gemma":[0.000195081,0.0001948954,0.000416763,0.0473897,0.0003503211,0.00006910741,0.00001110119,5.060155e-8,0.00572225,0.000002559238,0.9454347,0.0002135081],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.003416499,0.9952551,0.00000350363,0.00002521421,0.0001650839,0.0008322443,0.0001696488,0.000004689714,0.000128091],"genre_scores_gemma":[0.0002344233,0.9983121,0.0001310853,0.00002296275,0.00004618351,0.00001333122,0.0007973911,0.00002891026,0.0004136597],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9451333,"threshold_uncertainty_score":0.9999948,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01289892387975615,"score_gpt":0.2992943519151118,"score_spread":0.2863954280353557,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}