{"id":"W2942750393","doi":"10.5740/jaoacint.18-0329","title":"Confirmation and Identification of <i>Salmonella</i> spp., <i>Cronobacter</i> spp., and Other Gram-Negative Organisms by the Bruker MALDI Biotyper Method: Collaborative Study Method Extension to Include <i>Campylobacter</i> Species, Revised First Action 2017.09","year":2019,"lang":"en","type":"article","venue":"Journal of AOAC International","topic":"Enterobacteriaceae and Cronobacter Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Salmonella; Cronobacter; Campylobacter; Microbiology; Biology; Cronobacter sakazakii; Bacteria; Enterobacter; Escherichia coli; Genetics","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001299541,0.000211497,0.0003116366,0.0001253178,0.0001064533,0.0001765894,0.0003173252,0.0001170701,0.0001183654],"category_scores_gemma":[0.0001646711,0.0001577719,0.00007772002,0.0001649195,0.00008041167,0.00007558583,0.0002076206,0.0002200059,0.00001564256],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006533444,"about_ca_system_score_gemma":0.0000798561,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006862634,"about_ca_topic_score_gemma":0.0000643706,"domain_scores_codex":[0.997956,0.0003963907,0.0006875593,0.0003541832,0.0004348636,0.0001710236],"domain_scores_gemma":[0.9978772,0.0001138588,0.0007679787,0.0002874556,0.0008509142,0.0001025766],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0009497312,0.0002120362,0.01803309,0.00002810002,0.0003064644,0.000001682017,0.0009151839,0.00002742958,0.9739201,0.00002595298,0.004602596,0.0009776161],"study_design_scores_gemma":[0.002789029,0.001350325,0.08700827,0.0001240871,0.0001145545,0.0001746825,0.00339046,0.00009295616,0.8286878,0.00006865474,0.07590512,0.0002940875],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9900118,0.0002062122,0.007102784,0.001225314,0.0004251878,0.0006618504,0.0001269438,0.0000039929,0.0002359557],"genre_scores_gemma":[0.9946929,0.0003655356,0.002924973,0.0004941282,0.0002388533,0.00001177134,0.00004884618,0.00002897146,0.001194037],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1452323,"threshold_uncertainty_score":0.6433752,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01743816027738859,"score_gpt":0.3273926412995429,"score_spread":0.3099544810221543,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}