{"id":"W2942826440","doi":"10.1016/j.str.2019.03.021","title":"Structure and Assembly of the Enterohemorrhagic Escherichia coli Type 4 Pilus","year":2019,"lang":"en","type":"article","venue":"Structure","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":50,"is_retracted":false,"has_abstract":false,"ca_institutions":"","funders":"FP7 Ideas: European Research Council; Agence Nationale de la Recherche; European Commission; National Institute of General Medical Sciences; Centre National de la Recherche Scientifique; Institut Pasteur; Fondation pour la Recherche Médicale; European Research Council; National Institutes of Health; Institut national de la recherche scientifique","keywords":"Pilus; Pilin; Escherichia coli; Periplasmic space; Biology; Fimbriae Proteins; Fimbria; Flagellum; Subfamily; Biophysics; Biochemistry; Microbiology; Cell biology; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00001518415,0.00009651602,0.0001027349,0.000007980905,0.00005296755,0.00001948478,0.0001627574,0.00006892234,0.005594022],"category_scores_gemma":[0.000007781205,0.00006116847,0.00003183624,0.0001270243,0.0000760316,0.00008990494,0.0001665492,0.0001673198,0.00003012914],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002846355,"about_ca_system_score_gemma":0.00000586814,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001440056,"about_ca_topic_score_gemma":0.0001768848,"domain_scores_codex":[0.9995165,0.00002310163,0.00009627065,0.0001616606,0.00008343961,0.0001189628],"domain_scores_gemma":[0.999652,0.000009617461,0.00007360929,0.0002248264,0.000008350861,0.0000315576],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00001038697,0.000003759195,0.01378554,0.000008951479,0.000007211362,3.079112e-7,0.0001896886,0.00003141646,0.9848297,0.00003346391,0.0005121467,0.0005873775],"study_design_scores_gemma":[0.0002100985,0.00004607034,0.8151128,0.00001385391,0.00001897653,0.00002962181,0.00005806331,0.00006255887,0.1767021,0.0002855761,0.007348188,0.0001120781],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973435,0.00002560581,0.000002186842,0.0001355879,0.0007194389,0.0001466369,0.00005099243,0.000007946021,0.001568104],"genre_scores_gemma":[0.9981582,0.000003280457,0.0003422601,0.0002731681,0.00002735262,3.213142e-7,0.000003785428,0.000008805684,0.001182877],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8081276,"threshold_uncertainty_score":0.995315,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003515799268599802,"score_gpt":0.2010231200295123,"score_spread":0.1975073207609125,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}