{"id":"W2942996180","doi":"10.1186/s12879-019-3965-8","title":"Clostridium difficile isolated from faecal samples in patients with ulcerative colitis","year":2019,"lang":"en","type":"article","venue":"BMC Infectious Diseases","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph; University of Manitoba","funders":"Isfahan University of Medical Sciences; Islamic Azad University","keywords":"Clostridium difficile; Multilocus sequence typing; Microbiology; Ribotyping; Clindamycin; Metronidazole; Typing; Vancomycin; Medical microbiology; Biology; Pseudomembranous colitis; Clostridium difficile toxin A; Ulcerative colitis; Erythromycin; Antibiotic resistance; Medicine; Antibiotics; Internal medicine; Polymerase chain reaction; Staphylococcus aureus; Genotype; Disease; Bacteria; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003842448,0.0003397516,0.000445464,0.000918383,0.0005864224,0.0007357649,0.0002046557,0.0004644773,0.0008570321],"category_scores_gemma":[0.001796439,0.0002748472,0.0002648091,0.0008418242,0.0002705351,0.0002823446,0.000349919,0.0004051746,0.000194739],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002626096,"about_ca_system_score_gemma":0.0002983049,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001709539,"about_ca_topic_score_gemma":0.001996555,"domain_scores_codex":[0.9994211,0.0001008669,0.00009112684,0.0001043731,0.0001553658,0.0001271786],"domain_scores_gemma":[0.9991276,0.0001226051,0.0004231691,0.00002622949,0.0001569885,0.0001434775],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001347095,0.00006527526,0.9954277,0.00004529379,0.00001762008,0.001130308,0.0002181583,0.00001346697,0.001082776,0.00000476262,0.00009430956,0.001765619],"study_design_scores_gemma":[0.0000141279,0.0005469152,0.9910051,0.00004029011,0.00004824823,0.006160065,0.001077478,0.00006900512,0.0005148221,0.00001305215,0.0005050316,0.00000583125],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9991456,0.0004223412,0.00003077741,0.00003036511,0.00001244846,0.00001122516,0.00009368682,0.00000267489,0.000250662],"genre_scores_gemma":[0.99938,0.0001970571,0.0001217298,0.00006578729,0.00001611028,0.000006531614,0.0001385276,0.000001025604,0.0000731378],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001709539,"threshold_uncertainty_score":0.003399134,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01118103758134011,"score_gpt":0.2485056924558342,"score_spread":0.2373246548744941,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}