{"id":"W2943567636","doi":"10.3747/co.26.4731","title":"A Canadian Guideline on the Use of Next-Generation Sequencing in Oncology","year":2019,"lang":"en","type":"article","venue":"Current Oncology","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":50,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University Health Centre; Hospital for Sick Children; University of Toronto; Health Sciences Centre; CancerCare Manitoba; University of Alberta Hospital; Ottawa Hospital; University Health Network; Princess Margaret Cancer Centre; Sunnybrook Health Science Centre; Alberta Hospital Edmonton; Impact; Fluidigm (Canada)","funders":"Foundation Medicine; F. Hoffmann-La Roche; AstraZeneca; Pfizer","keywords":"Medicine; DECIPHER; Guideline; DNA sequencing; Genomics; Medical physics; Clinical trial; Clinical Oncology; Genomic sequencing; Computational biology; Bioinformatics; Cancer; Internal medicine; Pathology; Genome; Biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":true,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.008271922,0.0009317066,0.001141186,0.004136318,0.002585588,0.002596855,0.00479324,0.007122154,0.01145721],"category_scores_gemma":[0.02248739,0.0007354506,0.002461974,0.004798454,0.002112958,0.001582915,0.001868158,0.005798286,0.005794447],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0257342,"about_ca_system_score_gemma":0.102505,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.7730979,"about_ca_topic_score_gemma":0.8636153,"domain_scores_codex":[0.9906997,0.001568322,0.001218818,0.0003614282,0.005364586,0.0007871171],"domain_scores_gemma":[0.9748283,0.003812685,0.0009577175,0.0004824928,0.01847306,0.001445728],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00002268091,0.00002764839,0.0006208273,0.0008119229,0.00001981954,0.0003805457,0.0002179972,0.0003880817,0.0004426838,0.006349504,0.9140427,0.07667559],"study_design_scores_gemma":[0.00003298426,0.0000128673,0.001900638,0.002530084,0.00003395006,0.0004696506,0.0001141954,0.0001746679,0.0001587578,0.002195037,0.9923323,0.00004487938],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"other","genre_gemma":"other","genre_scores_codex":[0.002221292,0.1351022,0.02418847,0.3915579,0.01164229,0.004063354,0.02550141,0.001624106,0.4040989],"genre_scores_gemma":[0.03212461,0.2230373,0.1692808,0.3383369,0.00311302,0.005798881,0.04657963,0.001058536,0.1806702],"genre_candidate":"other","genre_consensus":"other","teacher_disagreement_score":0.2269021,"threshold_uncertainty_score":0.4564766,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.2153557568511918,"score_gpt":0.3647937102831273,"score_spread":0.1494379534319355,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}