{"id":"W2943806679","doi":"10.1128/mra.00404-19","title":"Complete Genome Sequences of Two USA300-Related Community-Associated Methicillin-Resistant Staphylococcus aureus Clinical Isolates","year":2019,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary; Alberta Health Services","funders":"Canadian Institutes of Health Research; Government of Canada; Alberta Health Services","keywords":"Staphylococcus aureus; Genome; Strain (injury); Methicillin-resistant Staphylococcus aureus; Biology; Microbiology; Whole genome sequencing; Genetics; Gene; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002275305,0.000806309,0.0005004177,0.001503649,0.0005904625,0.0005456013,0.000465803,0.0008169505,0.003976681],"category_scores_gemma":[0.001127359,0.0002396309,0.000530136,0.00344579,0.0002117438,0.0003789127,0.000387067,0.0009688515,0.002614394],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003352693,"about_ca_system_score_gemma":0.001255523,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005198203,"about_ca_topic_score_gemma":0.00720276,"domain_scores_codex":[0.9997675,0.00003056816,0.00002830373,0.00004555225,0.00008397186,0.00004416027],"domain_scores_gemma":[0.9993232,0.0002063437,0.0001176781,0.00005279388,0.0001930781,0.0001067943],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00380449,0.0005173591,0.01233986,0.002393619,0.0001124592,0.002563866,0.001118822,0.001231845,0.8953972,0.0009866456,0.0213573,0.05817638],"study_design_scores_gemma":[0.0004822141,0.001748246,0.4114155,0.0009334459,0.000713561,0.007196261,0.003045521,0.00680018,0.1598281,0.002328666,0.4051026,0.0004056861],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6072545,0.004358595,0.01051382,0.001210253,0.000416184,0.0004369964,0.3653679,0.0009446227,0.009497096],"genre_scores_gemma":[0.2210528,0.002503979,0.02708999,0.0003785202,0.00009716406,0.0003926893,0.7433038,0.0002714096,0.004909656],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005198203,"threshold_uncertainty_score":0.01330328,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04515067974899127,"score_gpt":0.3279746273524013,"score_spread":0.28282394760341,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}