{"id":"W2943953805","doi":"10.1093/gbe/evz093","title":"Remarkable Genome Stability among emm1 Group A Streptococcus in Belgium over 19 Years","year":2019,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Biology; Prophage; Genome; Streptococcus; Streptococcus pyogenes; Genetics; Whole genome sequencing; Group A; GC-content; Microbiology; Gene; Bacteria; Escherichia coli; Staphylococcus aureus; Bacteriophage","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002018491,0.000127465,0.0002527159,0.0001146003,0.00005745986,0.00000669754,0.00003352278,0.0002038978,0.0006721012],"category_scores_gemma":[0.00002490272,0.0001122054,0.00005953338,0.0002009099,0.0001232436,0.0000797657,0.00004964276,0.0001561018,0.00009840703],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002950589,"about_ca_system_score_gemma":0.00004157325,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001037448,"about_ca_topic_score_gemma":0.000282418,"domain_scores_codex":[0.9990131,0.00006736143,0.000213714,0.0003769795,0.00004872484,0.0002801122],"domain_scores_gemma":[0.999527,0.00003414201,0.00005778562,0.0002536219,0.00002545179,0.0001020088],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001099076,0.00016613,0.9815337,0.0000285968,0.00004829853,0.00000558355,0.00006976299,0.000004291002,0.01739603,0.0003394112,0.00001082572,0.0002874584],"study_design_scores_gemma":[0.001634421,0.0004808193,0.9950946,0.00001338154,0.00002991016,0.00000913607,0.00006340835,0.00005028558,0.00002084225,0.0006082468,0.001890329,0.000104607],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9961428,0.001021739,0.00006229753,0.00003216467,0.000164995,0.0008866271,0.00002833849,0.00003923407,0.001621776],"genre_scores_gemma":[0.9991878,0.00009082472,0.00006873798,0.0000382627,0.00006996626,0.00007955558,0.0001458758,0.00000876977,0.0003102404],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01737519,"threshold_uncertainty_score":0.7359037,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01095299141761106,"score_gpt":0.2605343758620969,"score_spread":0.2495813844444859,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}