{"id":"W2944238851","doi":"10.1186/s12917-019-1849-1","title":"Pathogenic potential and the role of clones and plasmids in beta-lactamase-producing E. coli from chicken faeces in Vietnam","year":2019,"lang":"en","type":"article","venue":"BMC Veterinary Research","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"CTT Group (Canada); Université de Montréal","funders":"Fonds de recherche du Québec – Nature et technologies","keywords":"Plasmid; Biology; Virulence; Pulsed-field gel electrophoresis; Microbiology; Antibiotic resistance; Ciprofloxacin; Gene; Genotype; Feces; Genetics; Antibiotics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001023842,0.0001069044,0.0002165466,0.0000800995,0.00004608921,0.00003498813,0.000211605,0.000117434,0.00002034301],"category_scores_gemma":[0.0001034674,0.00008285762,0.00003442719,0.0001135059,0.0003743638,0.000008918144,0.0004089636,0.0001737777,0.000003424823],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001109715,"about_ca_system_score_gemma":0.00006628409,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003065702,"about_ca_topic_score_gemma":0.0001855858,"domain_scores_codex":[0.9984383,0.0004559779,0.0002352835,0.0004114285,0.0001921053,0.0002669226],"domain_scores_gemma":[0.9993975,0.0001007466,0.00004955488,0.0003736737,0.00004102072,0.00003749089],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001451452,0.00002878378,0.3301538,0.00005191129,0.00001131914,0.000006777507,0.0001446614,0.000006677075,0.6676911,0.00002540205,0.000005891978,0.0004222618],"study_design_scores_gemma":[0.001941113,0.0005576008,0.9618659,0.00009001054,0.000005350525,0.00002266104,0.001150918,0.0004481839,0.03312489,0.00025481,0.000402736,0.000135811],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9966078,0.002656403,0.000003403805,0.0000642391,0.0000520164,0.0004076104,0.00002857353,0.000002317247,0.0001776631],"genre_scores_gemma":[0.9987696,0.0006463486,0.0003421964,0.000006534905,0.0000654688,0.00001429476,0.00002922816,0.00001500407,0.0001113019],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6345662,"threshold_uncertainty_score":0.3378836,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0261124674513626,"score_gpt":0.3024134524243572,"score_spread":0.2763009849729947,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}