{"id":"W2944854022","doi":"10.1186/s12870-019-1761-7","title":"Identification and characterization of water chestnut Soymovirus-1 (WCSV-1), a novel Soymovirus in water chestnuts (Eleocharis dulcis)","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant and Fungal Interactions Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Guangxi Academy of Agricultural Sciences","keywords":"Biology; ORFS; Phylogenetic tree; DNA sequencing; Genetics; Novel virus; Sequence analysis; Genome; Nucleic acid sequence; Virus; genomic DNA; Gene; Peptide sequence; Open reading frame; Virology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003227998,0.0001573714,0.0002249971,0.0001837174,0.00003726391,0.00002163778,0.0001676563,0.0002770715,0.00007734878],"category_scores_gemma":[0.00002934246,0.0001095654,0.00004912674,0.00005427335,0.00007745804,0.00001786454,0.000140943,0.0001346245,0.0001262842],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001406353,"about_ca_system_score_gemma":0.00003050467,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001014694,"about_ca_topic_score_gemma":0.0001595598,"domain_scores_codex":[0.9987389,0.0000795851,0.0003553612,0.0004105588,0.00007849774,0.0003370382],"domain_scores_gemma":[0.9995396,0.00002791321,0.00007425732,0.0002455947,0.00006259127,0.00005011675],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003671325,0.00008028556,0.04675642,0.00004755568,0.00002451281,0.000001290495,0.0001111594,0.000003759516,0.9523294,0.000052214,0.00002489846,0.0002013592],"study_design_scores_gemma":[0.0005721748,0.000143698,0.03246935,0.0000170117,0.000007204286,0.00005160065,0.00002527908,0.0005247405,0.9605404,0.00002050153,0.005463361,0.0001646486],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984043,0.00004795994,0.0005347616,0.00008243872,0.0002169766,0.0003031832,0.0002590467,0.000008762418,0.0001426207],"genre_scores_gemma":[0.9942364,0.0001919513,0.00005262108,0.00005710089,0.00009489684,0.00003811295,0.004266915,0.00001371501,0.00104825],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01428707,"threshold_uncertainty_score":0.4467947,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01932779769635288,"score_gpt":0.2602471149254794,"score_spread":0.2409193172291265,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}