{"id":"W2945077227","doi":"10.3791/59437","title":"Pattern-Triggered Oxidative Burst and Seedling Growth Inhibition Assays in <em>Arabidopsis thaliana</em>","year":2019,"lang":"en","type":"article","venue":"Journal of Visualized Experiments","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":22,"is_retracted":false,"has_abstract":true,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Respiratory burst; Elicitor; Arabidopsis thaliana; Seedling; Immune system; Plant Immunity; Arabidopsis; Biology; Immunity; Cell biology; Botany; Biochemistry; Immunology; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005030473,0.0002077244,0.0004090788,0.00009646922,0.0001327345,0.0001691638,0.0001831495,0.0001223242,0.0005832242],"category_scores_gemma":[0.00006094219,0.00009752694,0.0001375453,0.0002987247,0.0000302629,0.0006465976,0.00008803611,0.0002870516,0.00004302372],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001194734,"about_ca_system_score_gemma":0.00001395779,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002007217,"about_ca_topic_score_gemma":0.00009403367,"domain_scores_codex":[0.9983221,0.0002491658,0.0006026654,0.0002139314,0.000332336,0.0002798286],"domain_scores_gemma":[0.9989676,0.0001675636,0.0005072589,0.00005779101,0.0001820692,0.000117716],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001887124,0.0003406063,0.006243287,0.000008189007,0.00005375208,0.00002370168,0.000934909,0.000001338717,0.9887694,0.00001987805,0.0005163799,0.002899825],"study_design_scores_gemma":[0.003707302,0.00153063,0.1604522,0.0009640838,0.00004923686,0.0003427734,0.009102951,0.0001973116,0.8174264,0.0003129765,0.005259059,0.0006550666],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984149,0.0004418156,0.00001843359,0.0001796137,0.0003325659,0.0001846705,0.00003987738,0.00001262329,0.0003755399],"genre_scores_gemma":[0.9990756,0.0002770468,0.000130179,0.0001871011,0.0001234869,0.000005183127,0.00004147088,0.000002902229,0.0001570478],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.171343,"threshold_uncertainty_score":0.6385896,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02472152449287991,"score_gpt":0.3120137516462658,"score_spread":0.2872922271533859,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}