{"id":"W2945077227","doi":"10.3791/59437","title":"Pattern-Triggered Oxidative Burst and Seedling Growth Inhibition Assays in &lt;em&gt;Arabidopsis thaliana&lt;/em&gt;","year":2019,"lang":"en","type":"article","venue":"Journal of Visualized Experiments","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":22,"is_retracted":false,"has_abstract":true,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Respiratory burst; Elicitor; Arabidopsis thaliana; Seedling; Immune system; Plant Immunity; Arabidopsis; Biology; Immunity; Cell biology; Botany; Biochemistry; Immunology; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003484363,0.001010834,0.0003797739,0.0005787111,0.0003467851,0.0002461045,0.0008030988,0.0004534004,0.001344593],"category_scores_gemma":[0.000204943,0.0003625882,0.0004279459,0.0004180406,0.0003595889,0.0003276018,0.0004692945,0.001581422,0.0005576587],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007019854,"about_ca_system_score_gemma":0.0002929474,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001864236,"about_ca_topic_score_gemma":0.003882363,"domain_scores_codex":[0.9995304,0.0000838401,0.00005060477,0.0001282804,0.0001396507,0.00006713562],"domain_scores_gemma":[0.9994049,0.0001040281,0.0002031137,0.00008400836,0.00008209518,0.0001218072],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004732073,0.0000251929,0.00005362213,0.00001969973,0.000002675446,0.00001599168,0.00001480747,0.00002188762,0.9993421,0.00003939406,0.00002229829,0.0003949268],"study_design_scores_gemma":[0.000009307049,0.0001572723,0.001935678,0.000002882194,0.000007909312,0.00005205903,0.00001003093,0.0004760274,0.9968458,0.00002972884,0.0004655511,0.000007773498],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.82697,0.001000337,0.1612186,0.0002560313,0.000185912,0.000398847,0.002422331,0.002050841,0.005497127],"genre_scores_gemma":[0.8436148,0.001195199,0.1350541,0.0002653072,0.00004819665,0.001236262,0.003355261,0.0006972151,0.01453357],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001864236,"threshold_uncertainty_score":0.005093217,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02472152449287991,"score_gpt":0.3120137516462658,"score_spread":0.2872922271533859,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}