{"id":"W2945567733","doi":"10.1371/journal.pone.0217036","title":"Reclassification of breast cancer: Towards improved diagnosis and outcome","year":2019,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Breast Cancer Treatment Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Ontario; University of Toronto; St. Michael's Hospital","funders":"National Institute for Health and Care Research","keywords":"Breast cancer; Medicine; Oncology; Internal medicine; Cancer; Disease; Population; Epidemiology; Hormone receptor; Bioinformatics; Biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.01824772,0.0008349486,0.001196794,0.003482133,0.000374873,0.001964182,0.001065617,0.0009623125,0.001222356],"category_scores_gemma":[0.04107034,0.0002230703,0.001087623,0.00174615,0.0007702745,0.001345298,0.00145401,0.001734591,0.0003518072],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001327525,"about_ca_system_score_gemma":0.001468438,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004014078,"about_ca_topic_score_gemma":0.004115476,"domain_scores_codex":[0.99184,0.005499622,0.0004824297,0.001092047,0.0008225092,0.0002634524],"domain_scores_gemma":[0.9691667,0.01893228,0.007007281,0.001885171,0.002109577,0.0008990823],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004586314,0.000134407,0.8987541,0.0001725965,0.0006858463,0.00005503941,0.0002929924,0.01136264,0.0003364625,0.001221138,0.001827299,0.08469898],"study_design_scores_gemma":[0.0001300076,0.000534609,0.614996,0.0004986849,0.0008403075,0.0006241587,0.000690822,0.3363071,0.001132703,0.04022739,0.003898537,0.0001198265],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8848175,0.004713147,0.09854622,0.005189256,0.0001445744,0.000286152,0.002579244,0.0004222061,0.003301721],"genre_scores_gemma":[0.9841538,0.000418889,0.01349348,0.000205678,0.00006920741,0.00005869659,0.001391689,0.000026122,0.0001823785],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01824772,"threshold_uncertainty_score":0.09650433,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03682929828112923,"score_gpt":0.2613871483217365,"score_spread":0.2245578500406073,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}