{"id":"W2945678611","doi":"10.1101/636761","title":"Genome-wide association study of susceptibility to idiopathic pulmonary fibrosis","year":2019,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institut universitaire de cardiologie et de pneumologie de Québec; Université Laval; St. Paul's Hospital; University of British Columbia","funders":"Agencia Estatal de Investigación; Instituto de Salud Carlos III; Medical Research Council; National Institute for Health and Care Research; Agencia Canaria de Investigación, Innovación y Sociedad de la Información; National Institutes of Health; University of Leicester; Asthma and Lung UK; National Heart, Lung, and Blood Institute; British Lung Foundation; NIHR Leicester Biomedical Research Centre; Ministerio de Ciencia, Innovación y Universidades; Michael Smith Health Research BC; Instituto Tecnológico y de Energías Renovables; European Regional Development Fund; European Commission; Broad Institute; Wellcome Trust","keywords":"Idiopathic pulmonary fibrosis; Genome-wide association study; Genetic association; Biology; Disease; Allele; Genetic predisposition; Pulmonary fibrosis; Fibrosis; Genetics; Lung; Medicine; Single-nucleotide polymorphism; Gene; Genotype; Pathology; Internal medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00212474,0.0004755965,0.0006376611,0.001359413,0.000707004,0.0007501564,0.0006726486,0.0009251283,0.002828528],"category_scores_gemma":[0.00550224,0.0002665363,0.0011661,0.002140806,0.000562604,0.0002673301,0.0007329038,0.0009814968,0.0002239722],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002349565,"about_ca_system_score_gemma":0.000458764,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005370833,"about_ca_topic_score_gemma":0.004564564,"domain_scores_codex":[0.9973173,0.001009975,0.0002101665,0.0009884986,0.0002662202,0.0002078873],"domain_scores_gemma":[0.9952147,0.002457901,0.0009350856,0.0005497171,0.0003229031,0.0005196193],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0007386481,0.00005548806,0.9891933,0.00005402608,0.001897572,0.0005596931,0.0001001256,0.0002763389,0.003912359,0.0001429217,0.0002568675,0.002812711],"study_design_scores_gemma":[0.00003472694,0.00008809807,0.9979376,0.000008927942,0.0004310793,0.0003862674,0.00004461349,0.0004909641,0.0002267245,0.0001003892,0.0002447949,0.000005924795],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960829,0.001137398,0.0009849166,0.0001846553,0.00003113946,0.00001549384,0.0008524019,0.0000306412,0.0006805283],"genre_scores_gemma":[0.9988759,0.0001221763,0.0003654715,0.0000341721,0.00002035953,0.00001027999,0.0004080647,0.000005889336,0.0001576036],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005370833,"threshold_uncertainty_score":0.01123685,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01178001271886756,"score_gpt":0.2337578185562651,"score_spread":0.2219778058373975,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}