{"id":"W2945733117","doi":"10.1089/fpd.2018.2611","title":"Comparative Genomic Analysis of a Multidrug-Resistant <i>Listeria monocytogenes</i> ST477 Isolate","year":2019,"lang":"en","type":"article","venue":"Foodborne Pathogens and Disease","topic":"Listeria monocytogenes in Food Safety","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Science and Technology Planning Project of Guangdong Province; National Natural Science Foundation of China","keywords":"Biology; Genetics; Genome; Mobile genetic elements; Gene; Virulence; Listeria monocytogenes; Phylogenetic tree; Transposable element; Whole genome sequencing; Bacteria","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009805198,0.0002829045,0.000274506,0.0008463181,0.0002993103,0.0002754663,0.0001998699,0.0002524056,0.000553882],"category_scores_gemma":[0.0003064002,0.0001342127,0.0005157239,0.001032446,0.0001959363,0.00008131049,0.0003047443,0.0002558547,0.0002445362],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003721957,"about_ca_system_score_gemma":0.0005183269,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02033777,"about_ca_topic_score_gemma":0.01860981,"domain_scores_codex":[0.9998204,0.00001206397,0.00001254888,0.00004268141,0.00006101889,0.00005136729],"domain_scores_gemma":[0.9997681,0.00003767165,0.00005495261,0.00001562254,0.00007842705,0.00004532079],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001813856,0.00004688496,0.01276789,0.0001024974,0.00003623217,0.0004122495,0.0003005405,0.00008032083,0.9816427,0.00006594283,0.0001097373,0.004253576],"study_design_scores_gemma":[0.00002697603,0.0006343211,0.8365737,0.0000378483,0.0003391228,0.002560357,0.001236834,0.001499911,0.1500575,0.00005346779,0.006946066,0.00003386668],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9956643,0.0002237509,0.0008264486,0.00003471425,0.000008262863,0.00003048721,0.002048059,0.00002003078,0.001143934],"genre_scores_gemma":[0.9853973,0.0004045172,0.002624534,0.00009537416,0.000009996188,0.00003003162,0.01044161,0.00002926128,0.0009674341],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02033777,"threshold_uncertainty_score":0.04043877,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03997226355227196,"score_gpt":0.2997776572574358,"score_spread":0.2598053937051638,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}