{"id":"W2946220904","doi":"10.1128/genomea.00295-18","title":"Draft Genome Sequences of Four Clinical Legionella pneumophila Isolates from Ontario, Canada","year":2018,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Legionella and Acanthamoeba research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; Public Health Ontario","funders":"","keywords":"Legionella pneumophila; Biology; Outbreak; Legionella; Genome; Microbiology; Typing; Whole genome sequencing; Genetics; Virology; Gene; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006131191,0.001017596,0.0009203544,0.003099242,0.001900868,0.001944721,0.0009716729,0.0007594213,0.004281173],"category_scores_gemma":[0.00239985,0.0004800258,0.0009824852,0.007891186,0.0006217657,0.0003865486,0.0007083457,0.001155858,0.001707376],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.01099789,"about_ca_system_score_gemma":0.03602466,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.854856,"about_ca_topic_score_gemma":0.886189,"domain_scores_codex":[0.9993182,0.00002548802,0.00006115295,0.0001151122,0.0003091735,0.000170916],"domain_scores_gemma":[0.9975579,0.0001806671,0.0002649449,0.00008516693,0.001620508,0.0002908719],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00509928,0.0003768512,0.0817685,0.006144243,0.0005182007,0.004755171,0.0072615,0.006211001,0.6717123,0.00237301,0.09663871,0.1171413],"study_design_scores_gemma":[0.0003264314,0.0003537531,0.5884359,0.000729454,0.0007778383,0.001069652,0.00427497,0.003147071,0.03982795,0.0007920951,0.3600481,0.0002168519],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.2599919,0.004831773,0.007931477,0.00162089,0.0003865588,0.0008111414,0.7134469,0.001070443,0.009908983],"genre_scores_gemma":[0.1466556,0.003768351,0.02635194,0.0004282674,0.00004972082,0.000440467,0.810039,0.0002350858,0.01203145],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.145144,"threshold_uncertainty_score":0.2919975,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03463797884418708,"score_gpt":0.288309373323026,"score_spread":0.2536713944788389,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}