{"id":"W2946422050","doi":"10.1371/journal.ppat.1007731","title":"Structure and assembly of pilotin-dependent and -independent secretins of the type II secretion system","year":2019,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan","funders":"French Infrastructure for Integrated Structural Biology; Centre National de la Recherche Scientifique; Agence Nationale de la Recherche; Natural Sciences and Engineering Research Council of Canada; Infrastructures en Biologie Santé et Agronomie","keywords":"Periplasmic space; Vibrio vulnificus; Bacterial outer membrane; Secretion; Biology; Inner membrane; Cell biology; Cell envelope; Secretin; Type VI secretion system; Membrane protein; Biophysics; Biochemistry; Virulence; Membrane; Bacteria; Escherichia coli; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007109767,0.0002329859,0.0001392938,0.000158506,0.0002145013,0.0003605486,0.0002739156,0.0003072119,0.0003337939],"category_scores_gemma":[0.0002398972,0.0001730124,0.0002367436,0.0001500991,0.0001783397,0.0003368977,0.0002119939,0.0004489781,0.0001247506],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005535758,"about_ca_system_score_gemma":0.0002058425,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001381569,"about_ca_topic_score_gemma":0.0008443563,"domain_scores_codex":[0.9999459,0.000006331524,0.000005154846,0.00001537411,0.00001691401,0.00001040038],"domain_scores_gemma":[0.9998883,0.00001587381,0.00003824822,0.000009254099,0.00001562822,0.00003270654],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003748293,0.00005284122,0.004849932,0.0001124242,0.0000252457,0.0009600369,0.000248729,0.0029091,0.9860394,0.001106784,0.0001581687,0.003162442],"study_design_scores_gemma":[0.0001305845,0.0006171589,0.1772415,0.0001156144,0.00008588385,0.002946288,0.0007148765,0.08122399,0.7228623,0.001633525,0.01232858,0.00009967347],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978529,0.000444786,0.0009404861,0.00003387126,0.000007147355,0.000006429459,0.00009913194,0.0000129764,0.0006022053],"genre_scores_gemma":[0.9966983,0.000369639,0.001401936,0.00003465161,0.000003888723,0.000006912672,0.0005931902,0.000007186862,0.0008842096],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001381569,"threshold_uncertainty_score":0.004016519,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008644739152479678,"score_gpt":0.2218901845144593,"score_spread":0.2132454453619796,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}