{"id":"W2946825150","doi":"10.1016/j.cimid.2019.05.016","title":"Clostridioides difficile in bat guano","year":2019,"lang":"en","type":"article","venue":"Comparative Immunology Microbiology and Infectious Diseases","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; CHIST-ERA; Javna Agencija za Raziskovalno Dejavnost RS","keywords":"Clostridioides; Biology; Feces; Transmission (telecommunications); Population; C difficile; Zoonosis; Microbiology; Ribotyping; Clostridium difficile; Zoology; Veterinary medicine; Virology; Polymerase chain reaction; Environmental health; Antibiotics; Medicine; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00009745418,0.000294313,0.0007786141,0.0003692156,0.0001173218,0.00001935803,0.0001153754,0.0002651565,0.0007998616],"category_scores_gemma":[0.00008583169,0.0002554485,0.0001259862,0.0003400647,0.000625013,0.00008451456,0.0001692761,0.000524194,0.0004735979],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001604371,"about_ca_system_score_gemma":0.0001871565,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004839315,"about_ca_topic_score_gemma":0.00003958925,"domain_scores_codex":[0.9982706,0.0002225776,0.0003674684,0.0005497683,0.00005414924,0.0005353835],"domain_scores_gemma":[0.9990236,0.0003167061,0.00008387367,0.0003475918,0.0001193049,0.0001089293],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0008632873,0.0006707476,0.4524155,0.00005990682,0.0002338854,0.00004389237,0.0001763273,0.00001093816,0.5433382,0.0006969715,0.0008622283,0.0006280582],"study_design_scores_gemma":[0.01427626,0.005379678,0.6251773,0.0002998654,0.000232762,0.001717643,0.001380197,0.0001642783,0.3257726,0.0003968812,0.02422241,0.000980189],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.982539,0.01055654,0.000003939074,0.0002475091,0.0002806742,0.0007198976,0.00006901495,0.00009348228,0.005489966],"genre_scores_gemma":[0.9978524,0.0008847264,0.000007411634,0.0002257455,0.00005957596,0.00005406701,0.0001923231,0.00001678922,0.0007068975],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2175656,"threshold_uncertainty_score":0.9999897,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01607746398412543,"score_gpt":0.2859597030798482,"score_spread":0.2698822390957228,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}