{"id":"W2947049104","doi":"10.1186/s12864-019-5764-4","title":"Diversity of Bacillus cereus sensu lato mobilome","year":2019,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":60,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Conseil National de la Recherche Scientifique; Centre National de la Recherche Scientifique; Agence Universitaire de la Francophonie; Fonds De La Recherche Scientifique - FNRS; Université Catholique de Louvain","keywords":"Bacillus cereus; Biology; Cereus; Mobile genetic elements; Bacillus thuringiensis; Genetics; Sensu; Microbiology; Bacillaceae; Plasmid; Bacteria; Botany; Bacillus subtilis; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001683511,0.0001000483,0.0001520999,0.0000282033,0.00008521131,0.000007785667,0.0002322515,0.0001332955,0.0001244385],"category_scores_gemma":[0.0000293527,0.00009838806,0.00009885825,0.00005294622,0.00005446693,0.000001993181,0.0008598498,0.00006046439,0.0001068532],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002244828,"about_ca_system_score_gemma":0.0000939341,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007479533,"about_ca_topic_score_gemma":0.00006833345,"domain_scores_codex":[0.9992482,0.00003199301,0.0001427805,0.0002448957,0.0001158379,0.0002162708],"domain_scores_gemma":[0.9993579,0.00001140915,0.00005795509,0.0004024856,0.00009310577,0.00007709568],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002028968,0.00003393301,0.03475505,0.00004567707,0.00002816543,6.858403e-7,0.0001056687,0.0001026608,0.963777,0.000076333,0.0001955487,0.0006763453],"study_design_scores_gemma":[0.002431723,0.0008056111,0.04506004,0.00001224438,0.00002693615,0.00001366049,0.0002491733,0.0002962273,0.8015807,0.0002544613,0.1487079,0.0005613743],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960651,0.0002114823,0.0002297816,0.00001046893,0.0002119205,0.0002009309,0.0000654029,0.000004765622,0.003000125],"genre_scores_gemma":[0.9968758,0.000136835,0.000501378,0.00002883061,0.0001147119,0.000001759566,0.00003840688,0.00001405344,0.0022882],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1621964,"threshold_uncertainty_score":0.4012149,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01827047857074174,"score_gpt":0.2340513303480902,"score_spread":0.2157808517773485,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}