{"id":"W2947628378","doi":"10.1139/cjm-2018-0399","title":"Quantitative PCR enumeration of <i>vcgC</i> and 16S rRNA type A and B genes as virulence indicators for environmental and clinical strains of <i>Vibrio vulnificus</i> in Galveston Bay oysters","year":2019,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"16S ribosomal RNA; Vibrio vulnificus; Biology; Virulence; Microbiology; Ribosomal RNA; Bay; Enumeration; Strain (injury); Vibrio; Salinity; Vibrionaceae; Bacteria; Gene; Veterinary medicine; Ecology; Genetics","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004010174,0.0006136002,0.0002915996,0.0007710166,0.0002130634,0.0006165492,0.0003746011,0.0005077866,0.0007058561],"category_scores_gemma":[0.0005829748,0.0002394402,0.0002561358,0.0007252213,0.0004219104,0.0002809659,0.0002905398,0.0003606062,0.0002089901],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003836129,"about_ca_system_score_gemma":0.0002934951,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002696883,"about_ca_topic_score_gemma":0.004696297,"domain_scores_codex":[0.9992775,0.00007038294,0.00006417932,0.0003058908,0.0001783618,0.0001037199],"domain_scores_gemma":[0.9992564,0.0001435426,0.0002420839,0.00003474996,0.0002474223,0.00007583997],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002024101,0.0001079581,0.02794028,0.00007808087,0.00001876224,0.00002485923,0.0001782858,0.0001524782,0.9682911,0.00003126109,0.00004449152,0.002929941],"study_design_scores_gemma":[0.00002883044,0.002696171,0.5465581,0.00005146654,0.00008016563,0.0002896867,0.001390456,0.004100241,0.4422384,0.0000928247,0.002435341,0.00003829596],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9952613,0.0002020564,0.00213043,0.00002344813,0.00001231412,0.00008673374,0.001310866,0.00003432442,0.0009385781],"genre_scores_gemma":[0.9734564,0.0004517252,0.01648982,0.0001351631,0.00003350196,0.0005123894,0.004214722,0.00002644929,0.004679696],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002696883,"threshold_uncertainty_score":0.005362332,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01245526350866224,"score_gpt":0.2766424563134162,"score_spread":0.264187192804754,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}