{"id":"W2947628378","doi":"10.1139/cjm-2018-0399","title":"Quantitative PCR enumeration of <i>vcgC</i> and 16S rRNA type A and B genes as virulence indicators for environmental and clinical strains of <i>Vibrio vulnificus</i> in Galveston Bay oysters","year":2019,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"16S ribosomal RNA; Vibrio vulnificus; Biology; Virulence; Microbiology; Ribosomal RNA; Bay; Enumeration; Strain (injury); Vibrio; Salinity; Vibrionaceae; Bacteria; Gene; Veterinary medicine; Ecology; Genetics","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003483882,0.00008812276,0.0002660913,0.0001259526,0.00002600443,0.000006672156,0.00007529429,0.0001213232,0.000007459792],"category_scores_gemma":[0.0001255158,0.00007992669,0.00003409953,0.00003754167,0.0004893111,0.000008950458,0.00003255928,0.00007960724,3.666481e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001698462,"about_ca_system_score_gemma":0.0003024621,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001330863,"about_ca_topic_score_gemma":0.003720612,"domain_scores_codex":[0.9992079,0.0001089278,0.0003401878,0.0001614592,0.00002418186,0.0001574068],"domain_scores_gemma":[0.9994761,0.00005666672,0.0002257707,0.00007139617,0.00004677957,0.0001233148],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000153459,0.00001082954,0.1688408,0.0000298326,0.00006952441,0.000002507642,0.0001544516,0.000001490309,0.8297582,0.00001811154,0.000060141,0.0009006391],"study_design_scores_gemma":[0.005680238,0.01414527,0.5062207,0.0002158318,0.0001103963,0.0005279726,0.002842975,0.00001842462,0.4549254,0.00007908743,0.01475952,0.0004741918],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995346,0.004079917,0.00001593798,0.0001056375,0.00009071406,0.0001760512,0.0001684857,2.445637e-7,0.00001698835],"genre_scores_gemma":[0.9975686,0.001864367,0.0004074933,0.00006509804,0.0000218421,0.000001097148,0.00002783379,0.000007027568,0.0000366495],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3748328,"threshold_uncertainty_score":0.3259315,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01245526350866224,"score_gpt":0.2766424563134162,"score_spread":0.264187192804754,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}