{"id":"W2948070837","doi":"10.1128/mra.00511-19","title":"Draft Genome Sequences of Two Streptococcus pneumoniae Strains Causing Invasive Infections in Children in Qatar","year":2019,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"British Columbia Centre for Disease Control; Sidra Medicine","keywords":"Streptococcus pneumoniae; Population; Genome; Pneumococcal infections; Biology; Microbiology; Medicine; Gene; Genetics; Environmental health; Antibiotics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002431593,0.0002209102,0.0004712201,0.0005477163,0.00007257267,0.00001019017,0.0001168681,0.0001805212,0.0001700524],"category_scores_gemma":[0.00003589634,0.0002027223,0.00009531985,0.0005182407,0.0002209751,0.00008897851,0.00009344886,0.0004052385,0.00008410197],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000219528,"about_ca_system_score_gemma":0.0002565477,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003207303,"about_ca_topic_score_gemma":0.0007640914,"domain_scores_codex":[0.9983675,0.0001507885,0.0005392993,0.0004233791,0.00007995967,0.0004391143],"domain_scores_gemma":[0.9992968,0.0000484048,0.0001843818,0.0003332223,0.00006824363,0.00006895469],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000006060068,0.0001928017,0.496174,0.0000193652,0.00004833626,0.00001342475,0.000299327,0.0004676167,0.5027374,0.000005155628,0.000009645696,0.00002689018],"study_design_scores_gemma":[0.007106282,0.001600706,0.962396,0.0005813118,0.0001044775,0.0006793503,0.001096794,0.0000184746,0.00844551,0.0000402137,0.0173842,0.0005466356],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971649,0.0001379629,0.000005102634,0.0002294156,0.00008468362,0.001013594,0.0004518576,0.00002963452,0.000882823],"genre_scores_gemma":[0.9982826,0.00003512049,0.00001320274,0.0005412201,0.00004403152,0.00004181682,0.0008029168,0.00001761656,0.0002215256],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4942919,"threshold_uncertainty_score":0.8266777,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01144037880379602,"score_gpt":0.2677026362149085,"score_spread":0.2562622574111125,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}